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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 08:17:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus vulgaris genome assembly, chromosome: 11.
LR738622.1:10426981-10426999
GACTATGTCATAGCCTCAAAAAGAAAGTAA10426981TTGACAATAAAAAATGAGGGCAATGGTTTCCTGTCATTTCAAAAAGAGA
Acomys kempi genome assembly, chromosome: 5.
OU015359.1:55551677-55551695
AAAAAGTTAAACATACTTTCATAAAAATAG55551677TTGACAATAAAAAATGAGGTCTCTATATCTTTGTCATTTGCTAAGATTA
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:108525889-108525907
TGACAGTCCAATTGTTTTTTAAATTTCCGA108525889TTGACAATAAAAAATGAGGAACAATTGTAAATACAATTTGAATTTACTA
Cenchrus purpureus cultivar elephant grass chromosome A1.
CP053454.1:49471031-49471049
TTAACAACTCTCCAAATTGTTTTAAGCTTA49471031TTGACAATAAAAAATGAGGTGCTTGATTGTTTCATTATGATCATAGAAA
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:16959336-16959354
CAACAAATTAATTTTCAACCACTAGGTTAC16959336TTGACAATAAAAAATGAGGAATGGGAGATGCTCCATTTATGAGAAATAA
Ailanthus altissima genome assembly, chromosome: 12.
OX327694.1:17346683-17346701
AAATACAATTTATTTTAGAAGATTTAATGC17346683TTGACAATAAAAAATGAGGGTTTATGAGATTACAGAAGATATTTCTTCC
Acer campestre genome assembly, chromosome: 1.
OX940799.1:22420667-22420685
TAGTCAAACTTGCTTAACCGTCAACTAAAT22420667TTGACAATAAAAAATGAGGGTATTTTTGACCTTTCAAATATTTAAAATA
Ajuga chamaepitys genome assembly, chromosome: 2.
OY282496.1:19004203-19004221
GTGCTAAGGGCCACATATCAACTGGCTGTC19004203TTGACAATAAAAAATGAGGAGTTAGAAAGTTTGAGACAACTCAACAAAT
Medicago lupulina genome assembly, chromosome: 1.
OY283139.1:56989237-56989255
AATGAAAAGGAAAGAGCAGATGAGAATTTC56989237TTGACAATAAAAAATGAGGGGGATAAAGACAACACAGTTTAAAAGAAAG
Viscum album genome assembly, chromosome: 7_5.
OY728154.1:7948083-7948101
TTGTATTTTTTATCAAATAGGGTTGTTATT7948083TTGACAATAAAAAATGAGGCCTTATGAGAAGATGATATAATCCACCTTT
Phorcus lineatus genome assembly, chromosome: 6.
OV121086.1:48882468-48882486
CAAACCATTTGAAAAGGATTTAGAAATTAG48882468TTGACAATAAAAAATGAGGCTAGACTAAAGTATATTTGAAAAAAAACCA
Patella vulgata genome assembly, chromosome: 2.
OW026349.2:73600659-73600677
TCAATTCAGTATGACATTTCTCGCAGGAAT73600659TTGACAATAAAAAATGAGGAATAAATTATCCCGAACACAGTCCTGAACT
Agriopis marginaria genome assembly, chromosome: 24.
OW029938.1:12336446-12336464
AAGGACATTGAATCCACGGTCATGAAAATT12336446TTGACAATAAAAAATGAGGTAAGTCTTTGTTCAGCAGTGGACGTTTACT
Platycnemis pennipes genome assembly, chromosome: 3.
OW121849.1:87029322-87029340
ATCACCTTACAAAATCGTCAAAATATGGGT87029322TTGACAATAAAAAATGAGGGTTTAAAGCGCAGATATCAGCTTCTGGTGC
Meconema thalassinum genome assembly, chromosome: X.
OX336389.2:29017854-29017872
TAGAGGATACCATGAAAAGTTGGAAGAAGT29017854TTGACAATAAAAAATGAGGGTAACAGGTAGAAAAGAAATCAAGCTGAAA
Nephrotoma appendiculata genome assembly, chromosome: 3.
OX371225.1:156222955-156222973
ACTTGATTGTAATTACAGTTAATATGTATA156222955TTGACAATAAAAAATGAGGTTTTAACAAAAATTGGTAGTAAAAACATTA
Harmothoe impar genome assembly, chromosome: 3.
OX381706.1:31878899-31878917
TGCAATTCGTCCTGATTTTTTAAAATACTT31878899TTGACAATAAAAAATGAGGGGGGGGGGGGGGGGTCCGTGCGCTATATGA
Patella depressa genome assembly, chromosome: 4.
OX419718.1:60413428-60413446
TCAATTCAGCATGACATTTCTCGCAGGAAT60413428TTGACAATAAAAAATGAGGAATAAATTATCCCGAACACAGTCCTGAACT
Crepidodera aurea genome assembly, chromosome: 3.
OX439474.1:64071259-64071277
AGCACAGTTACTTCTATGCACAAAACAATT64071259TTGACAATAAAAAATGAGGGTTTACTGGGCATTTCCGAACCCAACGCTC
Hyppa rectilinea genome assembly, chromosome: 20.
OX637320.1:9548299-9548317
TGCCATTTACTGGTGCTCACTACATTTTTT9548299TTGACAATAAAAAATGAGGATAATTTATAACCTCAAATTTTCATCGATG
Amphimallon solstitiale genome assembly, chromosome: 6.
OY720680.1:62428961-62428979
GTAATTAGACATTTTTCTATATATATTATT62428961TTGACAATAAAAAATGAGGTGTGGCCACCACACGACTTTCTTATACGTA
Sepioteuthis lessoniana genome assembly, chromosome: 3.
OY757906.1:75642643-75642661
TCATATTTCAAGAAAATCTTTTCTCTTCAT75642643TTGACAATAAAAAATGAGGAAGAAACCGCTGTGATGTCATCAACAAGAA
Sarcophilus harrisii genome assembly, chromosome: 1.
LR735554.1:74957492-74957510
TGTTCATTTAATTTCTGATGTCCATCCATT74957492CCTCATTTTTTATTGTCAATAGTTTTAATGGATCAGAATTATTTTATAC
Martes martes genome assembly, chromosome: 3.
OY734065.1:183570124-183570142
TGAGATGTCCCTCTTCTTGAGATGTTCTTC183570124CCTCATTTTTTATTGTCAAAATCCTATTTATCATTTCATGGGCTCATCT
Cyprinus carpio genome assembly, scaffold: 000000316.
LN590800.1:293534-293552
TAGAATAGTTTGTCTCATTTGAACAGGCAT293534CCTCATTTTTTATTGTCAATGCAGAAAGAAATGAAGAAAAATATTGCAG
Larimichthys crocea genome assembly, chromosome: XIII.
LT972179.1:11983791-11983809
ACCACTTCAAACGGTGTCTTTATTTTCAAT11983791CCTCATTTTTTATTGTCAAAAGAAATCCAACTTTTATCATAATTCTCAC
Electrona antarctica genome assembly, chromosome: 9.
OX578254.1:14881007-14881025
TAATCACTTGTGGCGTCCTCAATTTTCTAT14881007CCTCATTTTTTATTGTCAATTCCGTGCTCAGCCAATCAAATCATTGCTA
Falco punctatus genome assembly, chromosome: 7.
OY723440.1:25394557-25394575
CACATCTTATAAAAGATTTTTCATGTTTTC25394557CCTCATTTTTTATTGTCAATGAGTTTTCTGTACTCTTCTGAGAGCTTGC
Allium cepa genome assembly, chromosome: 5.
LR994633.1:38202435-38202453
AGTAGGAGGCATGCAATGTTATCTTCCAAG38202435CCTCATTTTTTATTGTCAAGACCCCTTCTAATAAGAAATGCTTGATAGG
Mellicta athalia genome assembly, chromosome: 4.
HG992180.1:16163462-16163480
TCTGCATTCTCAACTAAAAACGTTACGGAT16163462CCTCATTTTTTATTGTCAAGTTCTTGAACTACGGCATTGGGTATTCACT
Agriopis aurantiaria genome assembly, chromosome: 3.
OU611983.1:6452875-6452893
TATTTTATTAACTGCAGACTGGAAAAGGTA6452875CCTCATTTTTTATTGTCAAACGTGGCGTTTAAGGAGTGATGAGGCAAGC
Bemisia tabaci genome assembly, chromosome: 1.
OU963862.1:5583396-5583414
AACAACACGACCTAAAGACCTTACATATAA5583396CCTCATTTTTTATTGTCAAGAAATGGGGGTCTAAGTACTTTGATTTTTA
Hippopus hippopus genome assembly, chromosome: 8.
OX328103.1:12966023-12966041
CATATAGTTATGATGAAATATCACATTTTT12966023CCTCATTTTTTATTGTCAACGAAATCTTGTTTTTTGTTTTTAGAATGAC
Athripsodes cinereus genome assembly, chromosome: 2.
OX388306.1:33814284-33814302
CTGTGGTATTGAATATAAACATAATAAAAT33814284CCTCATTTTTTATTGTCAATTCATACAAACAGGTAGTCACATTATTTGA
Eupithecia insigniata genome assembly, chromosome: 15.
OX402008.1:6750179-6750197
GACTCTGGAAATTATCAATTTTATATTAAT6750179CCTCATTTTTTATTGTCAATGATGCAAGATAGAAGTAAGGCACTCATTA
Cloeon dipterum genome assembly, chromosome: 1.
OX451259.1:29237634-29237652
AGAGCGTTAATTGAATTTAAAAACATTTGG29237634CCTCATTTTTTATTGTCAACAGGAAGGGTGAAGCTCAAACTCATAAAGT
Lacanobia oleracea genome assembly, chromosome: 24.
OX493409.1:3644307-3644325
TAAGTTAATAATGGCTGATATCAAAACTGT3644307CCTCATTTTTTATTGTCAAATCAAATCAAACATCAATAAGGTTATGACC
Amaurobius ferox genome assembly, chromosome: 4.
OX578137.1:55426236-55426254
AAGGTTTGCAAGTGATATGTGATTCTAAAA55426236CCTCATTTTTTATTGTCAAATTTACGCTAAAAAAAAAAAAAATCAATAT
Gymnocheta viridis genome assembly, chromosome: 4.
OY101443.1:2251632-2251650
AAAGTGTGACCACCCAGTGTCAAATATTTT2251632CCTCATTTTTTATTGTCAAATAATTATTAGTTCTTGCAAAGTTTTTGTA
Leucania comma genome assembly, chromosome: W.
OY282462.1:28753167-28753185
GTAACAAATTATCCAAGTACCCACATACGG28753167CCTCATTTTTTATTGTCAATTTCAAATGACAGCTGACATTGACACACCA
Leucania comma genome assembly, chromosome: 14.
OY282476.1:8487288-8487306
GTAACAAATTATCCAAGTACCCACATACGG8487288CCTCATTTTTTATTGTCAATTTCAAATGACAGCTGACATTGACACACCA
Cerastis leucographa genome assembly, chromosome: 16.
OY720361.1:17627708-17627726
CAAATAATAATAAAAAAAAGTTTTAAATGT17627708CCTCATTTTTTATTGTCAATAATATTTTAACCGTATAGGTTTTTTTAAT
Tridacna derasa genome assembly, chromosome: 8.
OY723421.1:13316228-13316246
CATATAGTTATGATGAAATATCACATTTTT13316228CCTCATTTTTTATTGTCAACGAAATCTTGTTTTTTGTTTTTAGAATGAC
Patella ulyssiponensis genome assembly, chromosome: 2.
OY783226.1:20335904-20335922
AGTTCAGGACTGTGTTCGGGATAATTTATT20335904CCTCATTTTTTATTGTCAAATTCCTGCGAGAAATGTCATGCTGAATTGA
Diogma glabrata genome assembly, chromosome: 1.
OY856186.1:58245340-58245358
TCAGCAGCAGTTTATTTGATCAAAGATTTA58245340CCTCATTTTTTATTGTCAACCATCGCATAGTTGTTTGATCAATTGCCTA
Troglohyphantes excavatus genome assembly, chromosome: 13.
OZ010678.1:54667947-54667965
CTGACGCCTTTAACCGCTCGGCCACGGAGG54667947CCTCATTTTTTATTGTCAAAAATGATCGCATATATCTACTTTTTGTTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGACAATAAAAAATGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGACAATAAAAAATGAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.258 | 0.250 | search_plus_done; http://172.18.8.135:50400/match?q=TTGACAATAAAAAATGAGG&k=0&no_gap=0&offset=0&limit=50
0.406 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCATTTTTTATTGTCAA&k=0&no_gap=0&offset=0&limit=28
0.421 | 0.015 | cgi_end;

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