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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:10:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

0169079 Brassica napus Flower Brassica napus cDNA, mRNA sequence.
EV133953.1:42-61
TACCCATCTCTCATTGGAAAACTCGTACAT42TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAGACTCTGAGTCA
0212166 Brassica napus Very early anther Brassica napus cDNA, mRNA sequence.
EV146232.1:189-208
ACCCATCTCTCATTGCCTAAACTCGTACAT189TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAGACTCTGAGTCA
BR075595 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-060B07 5', mRNA sequence.
EX089305.1:23-42
CGGATTGCCTAAACTCGTACAT23TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAGACTCTGAGTCA
TSA: Chorispora bungeana T_10501 mRNA sequence.
KA047331.1:335-354
GCATCTCTCTCATTGCCTAAACTCCAATGT335TTGACCCGAAAGTCCGAACCCACGATTCGACCCGCTCGAGCTATACCCGA
BONOE69TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BONOE69, genomic survey sequence.
BZ443498.1:250-269
ACCCATCTCTCATTGCCTAAACTCGTACAT250TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAAATTCTGAGACA
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:9545573-9545592
ACCCATCTCTCATTGCCTAAACTCGTACAT9545573TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAGACTCTGAGTCA
Brassica napus genome assembly, chromosome: A01.
HG994355.1:9720282-9720301
ACCCATCTCTCATTGCCTAAACTCGTACAT9720282TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAGACTCTGAGTCA
Brassica rapa genome, scaffold: A01.
LR031571.1:9572467-9572486
ACCCATCTCTCATTGCCTAAACTCGTATAT9572467TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAAACTCTGAGTCA
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:15489328-15489347
ACCCATCTCTCATTGCCTAAACTCGTACAT15489328TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAAATTCTGAGACA
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:9596434-9596453
ACCCATCTCTCATTGCCTAAACTCGTATAT9596434TTGACCCGAAAGTCCGAACCCGCTCGAGCTGTACCCGAAACTCTGAGTCA
Sequence 2045 from Patent WO2008034648.
FB782772.1:863-882
TGACTCAGAGTCTCGGGTACAGCTCGAGCG863GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGA
Sequence 2197 from Patent WO2008034648.
FB782924.1:897-916
TGACTCAGAGTCTCGGGTACAGCTCGAGCG897GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 7008 from Patent WO2008034648.
FB787735.1:863-882
TGACTCAGAGTCTCGGGTACAGCTCGAGCG863GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGA
Sequence 7076 from Patent WO2008034648.
FB787803.1:897-916
TGACTCAGAGTCTCGGGTACAGCTCGAGCG897GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 15428 from patent US 8030546.
GY467653.1:904-923
TGACTCAGAGTCTCGGGTACAGCTCGAGCG904GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 2045 from Patent EP2090662.
HB652831.1:863-882
TGACTCAGAGTCTCGGGTACAGCTCGAGCG863GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGA
Sequence 2197 from Patent EP2090662.
HB652983.1:897-916
TGACTCAGAGTCTCGGGTACAGCTCGAGCG897GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 7008 from Patent EP2090662.
HB657794.1:863-882
TGACTCAGAGTCTCGGGTACAGCTCGAGCG863GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGA
Sequence 7076 from Patent EP2090662.
HB657862.1:897-916
TGACTCAGAGTCTCGGGTACAGCTCGAGCG897GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 439 from Patent EP2183371.
HI543028.1:1036-1055
TGACTCAGAGTCTCGGGTACAGCTCGAGCG1036GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 446 from Patent EP2183371.
HI543035.1:961-980
TGACTCAGAGTCTCGGGTACAGCTCGAGCG961GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 499 from Patent EP2183371.
HI543088.1:920-939
TGACTCAGAGTCTCGGGTACAGCTCGAGCG920GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 439 from patent US 8686227.
HJ918592.1:1036-1055
TGACTCAGAGTCTCGGGTACAGCTCGAGCG1036GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 446 from patent US 8686227.
HJ918599.1:961-980
TGACTCAGAGTCTCGGGTACAGCTCGAGCG961GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 499 from patent US 8686227.
HJ918652.1:920-939
TGACTCAGAGTCTCGGGTACAGCTCGAGCG920GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 439 from Patent EP2910638.
JE864115.1:1036-1055
TGACTCAGAGTCTCGGGTACAGCTCGAGCG1036GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 446 from Patent EP2910638.
JE864122.1:961-980
TGACTCAGAGTCTCGGGTACAGCTCGAGCG961GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 499 from Patent EP2910638.
JE864175.1:920-939
TGACTCAGAGTCTCGGGTACAGCTCGAGCG920GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 439 from patent US 10155957.
MM471872.1:1036-1055
TGACTCAGAGTCTCGGGTACAGCTCGAGCG1036GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 446 from patent US 10155957.
MM471879.1:961-980
TGACTCAGAGTCTCGGGTACAGCTCGAGCG961GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 499 from patent US 10155957.
MM471932.1:920-939
TGACTCAGAGTCTCGGGTACAGCTCGAGCG920GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 15428 from patent US 10597667.
MO978806.1:904-923
TGACTCAGAGTCTCGGGTACAGCTCGAGCG904GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 439 from patent US 10961544.
MX514615.1:1036-1055
TGACTCAGAGTCTCGGGTACAGCTCGAGCG1036GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 446 from patent US 10961544.
MX514622.1:961-980
TGACTCAGAGTCTCGGGTACAGCTCGAGCG961GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 499 from patent US 10961544.
MX514675.1:920-939
TGACTCAGAGTCTCGGGTACAGCTCGAGCG920GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Sequence 439 from patent US 10995341.
MX642065.1:1036-1055
TGACTCAGAGTCTCGGGTACAGCTCGAGCG1036GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 446 from patent US 10995341.
MX642072.1:961-980
TGACTCAGAGTCTCGGGTACAGCTCGAGCG961GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATCCG
Sequence 499 from patent US 10995341.
MX642125.1:920-939
TGACTCAGAGTCTCGGGTACAGCTCGAGCG920GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Brassica oleracea var. viridis mRNA, clone: KALE-055O19, 3' end sequence.
DK536523.1:535-554
TGTCTCAGAATTTCGGGTACAGCTCGAGCG535GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Brassica oleracea var. viridis mRNA, clone: KALE-065C11, 3' end sequence.
DK540050.1:677-696
TGTCTCAGAATTTCGGGTACAGCTCGAGCG677GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Brassica oleracea var. viridis mRNA, clone: KALE-140P01, 3' end sequence.
DK569006.1:534-553
TGACTCAGAATTTCGGGTACAGCTCGAGCG534GGTTCGGACTTTCGGGTCAAATGTACGAATTTAGGCAATGAGAGATGGGT
0169270 Brassica napus Flower Brassica napus cDNA, mRNA sequence.
EV134144.1:425-444
TGACTCAGAGTCTCGGGTACAGCTCGAGCG425GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_5490.
FX703686.1:944-963
TGACTCAGAGTCTCGGGTACAGCTCGAGCG944GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_32134.
FX739420.1:1129-1148
TGACTCAGAGTCTCGGGTACAGCTCGAGCG1129GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
TSA: Chorispora bungeana CK_12616 mRNA sequence.
KA000683.1:341-360
TCGGGTATAGCTCGAGCGGGTCGAATCGTG341GGTTCGGACTTTCGGGTCAAACATTGGAGTTTAGGCAATGAGAGAGATGC
Brassica napus NAC-domain protein 485 (NAC485) mRNA, complete cds.
AY245887.1:904-923
TGACTCAGAGTCTCGGGTACAGCTCGAGCG904GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 13.
CP124707.1:28489242-28489261
TATTGCTTTGTGTTATCGCTTTGCTCCTCG28489242GGTTCGGACTTTCGGGTCAACAAAGACCCGTTTCAGCGCTTTCAATTTTA
Brassica napus NAC transcription factor 72 (NAC72.1) mRNA, complete cds.
KC966756.1:863-882
TGACTCAGAGTCTCGGGTACAGCTCGAGCG863GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT
Brassica oleracea var. italica NAC-domain protein mRNA, complete cds.
KF715853.1:876-895
TGTCTCAGAATTTCGGGTACAGCTCGAGCG876GGTTCGGACTTTCGGGTCAAATGTACGAGTTTAGGCAATGAGAGATGGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGACCCGAAAGTCCGAACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGACCCGAAAGTCCGAACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.417 | 0.408 | search_plus_done; http://172.18.8.135:50400/match?q=TTGACCCGAAAGTCCGAACC&k=0&no_gap=0&offset=0&limit=50
1.717 | 1.300 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTCGGACTTTCGGGTCAA&k=0&no_gap=0&offset=0&limit=40
1.743 | 0.026 | cgi_end;

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