GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 08:12:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

pOP-CNH02040_EST_C_1_pSK_SK CNH (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNH02040 5', mRNA sequence.
EY400058.1:290-312
ATATAAAATCTCATGATGAATAACATATTA290TGCTATCTCTTGTATTTTATCAATTCTCGATTGTACGCTATCCACCGTGCATA
pOP-CNH00887_EST_C_1_pSK_SK CNH (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNH00887 5', mRNA sequence.
EY400928.1:290-312
ATATAAAATCTCATGATGAATAACATATTA290TGCTATCTCTTGTATTTTATCAATTCTCGATTGTACGCTATCCACCGTGCATA
pOP-CNH02100_EST_C_1_pSK_SK CNH (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNH02100 5', mRNA sequence.
EY402853.1:277-299
ATATAAAATCTCATGATGAATAACATATTA277TGCTATCTCTTGTATTTTATCAATTCTCGATTGTACGCTATCCACCGTGCATA
pOP-CNH00948_EST_C_1_pSK_SK CNH (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNH00948 5', mRNA sequence.
EY403249.1:290-312
ATATAAAATCTCATGATGAATAACATATTA290TGCTATCTCTTGTATTTTATCAATTCTCGATTGTACGCTATCCACCGTGCATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGATAAAATACAAGAGATAGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGATAAAATACAAGAGATAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=TTGATAAAATACAAGAGATAGCA&k=0&no_gap=0&offset=0&limit=50
0.367 | 0.257 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTATCTCTTGTATTTTATCAA&k=0&no_gap=0&offset=0&limit=50
0.370 | 0.003 | cgi_end;

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