GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 07:51:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT32K11, TM0710.
AP007535.2:50157-50176
CCTTAGAGTGTGTTTGTTTTATTGTTTCCT50157GTTTTCCAATGCACGATCAACATGAAAACAAGCTTCTTGTCCCACTAGGA
Lotus japonicus genomic DNA, chromosome 3, clone: LjT42D01, TM0711.
AP007536.2:92350-92369
CCTTAGAGTGTGTTTGTTTTATTGTTTCCT92350GTTTTCCAATGCACGATCAACATGAAAACAAGCTTCTTGTCCCACTAGGA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:63320250-63320269
CCTTAGAGTGTGTTTGTTTTATTGTTTCCT63320250GTTTTCCAATGCACGATCAACATGAAAACAAGCTTCTTGTCCCACTAGGA
Oligia latruncula genome assembly, chromosome: 20.
OX419703.1:4489710-4489729
GTACCGCCACAGAATTTAACAAATCTTTAA4489710GTTTTCCAATGCACGATCAAACTTCTCGATGAACGAAATTTTTTTTTATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGATCGTGCATTGGAAAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGATCGTGCATTGGAAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=TTGATCGTGCATTGGAAAAC&k=0&no_gap=0&offset=0&limit=50
0.122 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTTCCAATGCACGATCAA&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.003 | cgi_end;

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