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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:21:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Betta splendens genome assembly, chromosome: 10.
LR132007.3:9522135-9522154
GGAGAGCAACGGCGGGTGGAAGGTGAGGGG9522135TTGCAGAAGCAGAAAAAGGGGTCAGTGAGGGAGTGAATGGGGTGAAGACC
Erpetoichthys calabaricus genome assembly, chromosome: 5.
LR536436.2:209573517-209573536
ATGTAATTAAGATTATTAATATGATTCAAA209573517TTGCAGAAGCAGAAAAAGGGAACATATAAAAACGAATGTTGACCAATCTG
Salarias fasciatus genome assembly, chromosome: 11.
LR597446.1:7031683-7031702
CACCCAGCATGTGTCAGATCGAAGCAGGTT7031683TTGCAGAAGCAGAAAAAGGGACAAAGAAGGATGCTGTTGTGAAAGTGAAC
Anas platyrhynchos genome assembly, chromosome: 5.
LS423615.1:29383184-29383203
CTCCCCCACCCAAAGCTCCAGTTCTAGTGC29383184TTGCAGAAGCAGAAAAAGGGAACTGATCCTGTTGAAAACAAACATGGAAA
Somateria mollissima genome assembly, chromosome: 5.
OX598694.1:31094016-31094035
CTCCCCCACCCAAAGCTCCAGTTCTACTGC31094016TTGCAGAAGCAGAAAAAGGGAACTGATCCTGTTGAAAACAAACATGGAAA
Anas acuta genome assembly, chromosome: 5.
OZ009967.1:39980104-39980123
TAACTGCAAGGAAGGGGGCATAAAACAGAA39980104TTGCAGAAGCAGAAAAAGGGTCCCTGGGTGAGAATCACTCTTGGGTGGCT
Lacibacter sediminis strain S13-6-22 chromosome, complete genome.
CP060007.1:4043508-4043527
AATACGCAGGCTTAACTGCTGAAACTGAAA4043508TTGCAGAAGCAGAAAAAGGGTTCAGTGGTTTGATCAACTACAAAGTGAAA
Nesidiocoris tenuis Japan DNA, chromosome 2, sequence.
AP028910.1:7965365-7965384
CTAAAACGGGGAAACAAAACGGGTTTGCTG7965365TTGCAGAAGCAGAAAAAGGGGGAGAATCTGTACGGAAGAGGAAAAGAGAC
Anas platyrhynchos genome assembly, chromosome: 5.
LS423615.1:24402585-24402604
AGCCACCCAAGAGTGATTCTCACCCAGGGA24402585CCCTTTTTCTGCTTCTGCAATTCTGTTTTATGCCCCCTTCCTTGCAGTTA
Somateria mollissima genome assembly, chromosome: 5.
OX598307.1:35210067-35210086
TTTCCATGTTTGTTTTCAACAGGATCAGTT35210067CCCTTTTTCTGCTTCTGCAAGCACTAGAACTGGAGCTTTGGGTGGGGGAG
Anas acuta genome assembly, chromosome: 5.
OZ009967.1:35004831-35004850
TTTCCATGTTTGTTTTCAACAGGATCAGTT35004831CCCTTTTTCTGCTTCTGCAAGCCCTAGAACTGGAGCTTTGGGTGGGGGAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR812263.1:546994347-546994366
ATCAAAACCAGTTGTGTCCTTGTAAACATT546994347CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828089.1:526309793-526309812
ATCAAAACCAGTTGTGTACTTGTAAACATT526309793CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828110.1:508420468-508420487
ATCAAAACCAGTTGTGTCCTTGTAAACATT508420468CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828183.1:530011330-530011349
ATCAAAACCAGTTGTGTCCTTGTAAACATT530011330CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828275.1:546444542-546444561
ATCAAAACCAGTTGTGTCCTTGTAAACATT546444542CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OU015703.1:541695133-541695152
ATCAAAACCAGTTGTGTACTTGTAAACATT541695133CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX459932.1:530382552-530382571
ATCAAAACCAGTTGTGTCCTTGTAAACATT530382552CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459972.1:529673669-529673688
ATCAAAACCAGTTGTGTACTTGTAAACATT529673669CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460007.1:528989332-528989351
ATCAAAACCAGTTGTGTCCTTGTAAACATT528989332CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460021.1:526616894-526616913
ATCAAAACCAGTTGTGTCCTTGTAAACATT526616894CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460042.1:531081828-531081847
ATCAAAACCAGTTGTGTCCTTGTAAACATT531081828CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460049.1:526954531-526954550
ATCAAAACCAGTTGTGTACTTGTAAACATT526954531CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460070.1:530095498-530095517
ATCAAAACCAGTTGTGTCCTTGTAAACATT530095498CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460084.1:524640094-524640113
ATCAAAACCAGTTGTGTACTTGTAAACATT524640094CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460168.1:524248686-524248705
ATCAAAACCAGTTGTGTCCTTGTAAACATT524248686CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460203.1:532314120-532314139
ATCAAAACCAGTTGTGTCCTTGTAAACATT532314120CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460259.1:532430794-532430813
ATCAAAACCAGTTGTGTCCTTGTAAACATT532430794CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX460294.1:530843839-530843858
ATCAAAACCAGTTGTGTCCTTGTAAACATT530843839CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 3H.
OX590757.1:521791232-521791251
ATCAAAACCAGTTGTGTCCTTGTAAACATT521791232CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX638655.1:531205182-531205201
ATCAAAACCAGTTGTGTCCTTGTAAACATT531205182CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638765.1:526905818-526905837
ATCAAAACCAGTTGTGTACTTGTAAACATT526905818CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638772.1:525670225-525670244
ATCAAAACCAGTTGTGTACTTGTAAACATT525670225CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638779.1:529128546-529128565
ATCAAAACCAGTTGTGTCCTTGTAAACATT529128546CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX638786.1:521288087-521288106
ATCAAAACCAGTTGTGTCCTTGTAAACATT521288087CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare genome assembly, chromosome: 3H.
OX638821.1:527588428-527588447
ATCAAAACCAGTTGTGTACTTGTAAACATT527588428CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638870.1:531070437-531070456
ATCAAAACCAGTTGTGTACTTGTAAACATT531070437CCCTTTTTCTGCTTCTGCAAGCTCATCTTCTTTAGTCATCTAATCCAACC
Erodium maritimum genome assembly, chromosome: 3.
OY997590.1:27775727-27775746
CACATCTAATGTTTCGTGTCGTTCGTCAAT27775727CCCTTTTTCTGCTTCTGCAACCGTGTCTCCAAGATTGTGGCATTCTCGTT
Aphrophora alni genome assembly, chromosome: X.
OY740765.1:114963815-114963834
TAAGCATCCTTCGCAGTATGTACTACATGA114963815CCCTTTTTCTGCTTCTGCAAAGTATGCATTCAATTGAGATACTGTGTAGT
Sepia lycidas genome assembly, chromosome: 14.
OZ010584.1:6902216-6902235
GGCAAGCCATTATCTTCATGTATATTTCCT6902216CCCTTTTTCTGCTTCTGCAACAGATGCAGTTTCCATAGACATCACAGTCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCAGAAGCAGAAAAAGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCAGAAGCAGAAAAAGGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.198 | 0.190 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCAGAAGCAGAAAAAGGG&k=0&no_gap=0&offset=0&limit=50
0.341 | 0.142 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTTTTTCTGCTTCTGCAA&k=0&no_gap=0&offset=0&limit=42
0.361 | 0.021 | cgi_end;

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