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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:01:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

GC_Bb046O21.R GC_Bb Glycine cyrtoloba genomic 3', genomic survey sequence.
HN893457.1:115-134
ATGCTTCCAACGCCACCGTCCCCTCTCATG115TTGCAGCCTTTGATGAAGTGTTTATACTTCTGAGGGTTGTCGAAGCTACG
GC_Bb110C05.R GC_Bb Glycine cyrtoloba genomic 3', genomic survey sequence.
HN958229.1:86-105
ATGCTTCCAACGCCACCGTCCCCTCTCATG86TTGCAGCCTTTGATGAAGTGTTTATACTTCTGAGGGTTGTCGAAGCTACG
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:6869078-6869097
ATGCTACCGACGCCACCGTCACCTTGCATG6869078TTGCAGCCTTTGATGAAGTGCTTGTACTTCTGAGGATTCTCGAAGCTTCT
Dunaliella primolecta genome assembly, chromosome: 1.
OU611751.1:5217716-5217735
AAAAGGATGAGATCCGAAAGCACGATTCAT5217716TTGCAGCCTTTGATGAAGTGCTGCAGCAAGCGCTTGAGATGAATGTGGAC
Thysanoteuthis rhombus genome assembly, chromosome: 12.
OY735209.1:57875706-57875725
GGCATTATGCCAGTTTCGTGGTCCGGCTTT57875706TTGCAGCCTTTGATGAAGTGAAGTATCTATCCTTCTCATGTCAACGAAAC
Xyrichtys novacula genome assembly, chromosome: 6.
OY660869.1:8486729-8486748
GAGGAGCAATGACAGATTCAGAATCGGACA8486729CACTTCATCAAAGGCTGCAAGAAATTTCAGGTATTGCAGTCGCTCTTACA
Dianthus caryophyllus mRNA, clone: CES04M19, 5' end sequence.
FY383907.1:283-302
CGCCGCTTCGACAACCCTCAACGGTACAAA283CACTTCATCAAAGGCTGCAAAATGACTCATGGGTGCGGTACCACCGTAGG
Lepeophtheirus salmonis strain IoA-00 genome assembly, chromosome: 14.
HG994593.1:12392737-12392756
ATTTTCATAAAGAAAAGTTGCCTCAGAAAA12392737CACTTCATCAAAGGCTGCAACATTCACAGGACTCAATGATGACTTCATTG
Lepeophtheirus salmonis strain IoA-00 genome assembly, chromosome: 14.
LR794197.1:12392737-12392756
ATTTTCATAAAGAAAAGTTGCCTCAGAAAA12392737CACTTCATCAAAGGCTGCAACATTCACAGGACTCAATGATGACTTCATTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCAGCCTTTGATGAAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCAGCCTTTGATGAAGTG | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.243 | 0.235 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCAGCCTTTGATGAAGTG&k=0&no_gap=0&offset=0&limit=50
0.371 | 0.128 | search_minus_done; http://172.18.8.135:50400/match?q=CACTTCATCAAAGGCTGCAA&k=0&no_gap=0&offset=0&limit=45
0.374 | 0.003 | cgi_end;

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