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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:35:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lutra lutra genome assembly, chromosome: 4.
LR738406.1:117508033-117508052
ATCTTAAAAGGATTATTAGGGTAATGACTT117508033TTGCATATGTGGTGGAGGAAACAGCAACTTTCTGTATATTAGCAGGGCGT
Erinaceus europaeus genome assembly, chromosome: 18.
OX485828.1:69803783-69803802
AGTGTGGTAGGGGCCAGACTCAAACCTGGG69803783TTGCATATGTGGTGGAGGAACACATTATCCAAACGAACTATTTCTGCAGC
TSA: Lactuca sativa Letassy_X1_18193 mRNA sequence.
JI574172.1:2066-2085
TGGGTTTTCATGTGTTTGTTGTGATTGTGA2066TTGCATATGTGGTGGAGGAAGTTGTTGTTGTGGTTGTTGTTGTTGTTGTG
TSA: Lactuca serriola Serrassy_T_P2_61797 mRNA sequence.
JO021569.1:2068-2087
TGGGTTTTCATGTGTTTGTTGTGATTGTGA2068TTGCATATGTGGTGGAGGAAGTTGTTGTTGTTGTTGTGGTTGTTGTTGTG
Chionographis japonica genome assembly, chromosome: 6.
OX393554.1:33718501-33718520
ATGTAATGCATTAATTTTTTTCTCAAGCAA33718501TTGCATATGTGGTGGAGGAAAACGAGACAAAATCATATCTAATCTATACC
Lactuca saligna genome assembly, chromosome: 5.
OX465081.1:85419644-85419663
TGGGTTTTCATGTGTTTGTTGTGATTGTGA85419644TTGCATATGTGGTGGAGGAAGTTGTTGTTGTTGTTGTGGTTGTTGTTGTT
Zinnia elegans cDNA, clone:Z12856.
AU303890.1:123-142
CCTTCAACAAGCAAGCACAAGGACAAACAC123TTCCTCCACCACATATGCAATCTTTGCAACAACCACAACCACATTCTCAA
QGD5H21.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGD5H21, mRNA sequence.
BQ869210.1:346-365
CACAACAACAACAACAACCACAACAACAAC346TTCCTCCACCACATATGCAATCACAATCACAACAAACACATGAAAACCCA
QGD6P10.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGD6P10, mRNA sequence.
BQ869702.1:483-502
CACAACAACAACAACAACCACAACAACAAC483TTCCTCCACCACATATGCAATCACAATCACAACAAACACATGAAAACCCA
QGD9F10.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGD9F10, mRNA sequence.
BQ870539.1:692-711
CACAACAACAACAACAACCACAACAACAAC692TTCCTCCACCACATATGCAATCACAATCACAACAAACACATGAAAA
QGG16M19.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG16M19, mRNA sequence.
BQ997563.1:345-364
CACAACAACAACCACAACAACAACAACAAC345TTCCTCCACCACATATGCAATCACAATCACAACAAACACATGAAAACCCA
QGG18A14.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG18A14, mRNA sequence.
BQ997997.1:484-503
CACAACAACAACCACAACAACAACAACAAC484TTCCTCCACCACATATGCAATCACAAT
QGG22N11.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGG22N11, mRNA sequence.
BQ999709.1:375-394
CACAAGAACAACCACAACGACAACAACAAC375TTCCTCCACCACATATGCAAGCACAATCACAACAAACACATGAAAACCCA
QGH6J10.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGH6J10, mRNA sequence.
BU008126.1:346-365
CACAACAACAACCACAACAACAACAACAAC346TTCCTCCACCACATATGCAATCACAATCACAACAAACACATGAAAACCCA
CLSM8380.b1_H08.ab1 CLS(LMS) lettuce sativa Lactuca sativa cDNA clone CLSM8380, mRNA sequence.
DY974700.1:193-212
CACAACAACAACAACAACCACAACAACAAC193TTCCTCCACCACATATGCAATCACAATCACAACAAACACATGAAAACCCA
Chionographis japonica genome assembly, chromosome: 6.
OX393554.1:53510422-53510441
GGTTTGAATGGGGTATAACTTTGTATATCT53510422TTCCTCCACCACATATGCAATTGTGAGTAAAAAATTCATTCATTGTATTA
Agrypnus murinus genome assembly, chromosome: 1.
OV816024.1:35676517-35676536
ACAACTGTATATTGTGTAGGCCAAGAGATG35676517TTCCTCCACCACATATGCAACCACAAACTTCGCCTAAACCACCTACTCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCATATGTGGTGGAGGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCATATGTGGTGGAGGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.179 | 0.170 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCATATGTGGTGGAGGAA&k=0&no_gap=0&offset=0&limit=50
0.429 | 0.251 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCTCCACCACATATGCAA&k=0&no_gap=0&offset=0&limit=44
0.437 | 0.007 | cgi_end;

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