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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:10:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A08.
HG996472.1:32369312-32369331
TTACCAATGCGCAATATCAAGATCAGACTT32369312TTGCCATGTTCCTGTGTGTTGGCTGAGTTATTTGGCTGTTGCTAGCAGCT
Lamellibrachia columna genome assembly, chromosome: 5.
OY759265.1:44189514-44189533
CACGTTAATAGAGGACTGCTTTAATGGTGT44189514TTGCCATGTTCCTGTGTGTTACTGTGTGTTCCTGTGTGTTCTTGTGTGTT
Erithacus rubecula genome assembly, chromosome: Z.
LR812112.1:31176987-31177006
TTGAGAAAATCTGCTTTACAGCCCCTTAAA31176987AACACACAGGAACATGGCAAACCTTGCTAAATGCTTTCACTCCATGACAA
Rana temporaria genome assembly, chromosome: 4.
LR991683.1:200753286-200753305
TTTGAAATGTATCCAGAAATACATAAAAAA200753286AACACACAGGAACATGGCAAAAACTTGTTAAAAACGTGCATTCACAAACG
Meleagris gallopavo genome assembly, chromosome: 13.
OW982265.1:2035471-2035490
GGGGCTAACGTTTCTTATCATATACACACA2035471AACACACAGGAACATGGCAACCAAAGACACTTGATGCTGGTAGAAGAATA
Meleagris gallopavo genome assembly, chromosome: 13.
OW982304.1:1820673-1820692
GGGGCTAACGTTTCTTATCATATACACACA1820673AACACACAGGAACATGGCAACCAAAGACACTTGATGCTGGTAGAAGAATA
Callithrix jacchus clone CH259-50K8, WORKING DRAFT SEQUENCE, 6 ordered pieces.
AC188226.1:92183-92202
GGCAGAGGAGGGGCAGCTATGTGTGAGGTA92183AACACACAGGAACATGGCAATAACCATAAACAGGAACATGGCAATAACCA
Musa acuminata subsp. malaccensis isolate AA chromosome 8.
CP126377.1:35144142-35144161
AGCTGCTAGCAACAGCCAAATAACTCAGCC35144142AACACACAGGAACATGGCAAAAGTCTGATCTTGATATTGCGCATTGGTAA
Musa acuminata subsp. malaccensis isolate AA chromosome 19.
CP126388.1:34953740-34953759
AGCTGCTAGCAACAGCCAAATAACTCAGCC34953740AACACACAGGAACATGGCAAAAGTCTGATCTTGATATTGCGCATTGGTAA
Musa schizocarpa genome assembly, chromosome: S08.
LS990922.1:38587498-38587517
AGCTGCTAGCAACAGCCAAATAACTCAGCC38587498AACACACAGGAACATGGCAAAAGTCTGATCTTGATATTGCGCATTGGTAA
Podabrus alpinus genome assembly, chromosome: 1.
OW026451.1:83554983-83555002
ATAATCGACCGCGTTACTACAGAAGAGATG83554983AACACACAGGAACATGGCAATCTGTGAGATATTGAGAATCTTTGTGAAAG
Hemicrepidius niger genome assembly, chromosome: 7.
OY720165.1:31997591-31997610
ATAATCGTCCGCATTATTTCAGAAGGGATG31997591AACACACAGGAACATGGCAACCTATTCGATATTAGTAGGGACTTATATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCCATGTTCCTGTGTGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCCATGTTCCTGTGTGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.230 | 0.221 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCCATGTTCCTGTGTGTT&k=0&no_gap=0&offset=0&limit=50
0.339 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=AACACACAGGAACATGGCAA&k=0&no_gap=0&offset=0&limit=48
0.346 | 0.007 | cgi_end;

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