GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:47:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Apodemus sylvaticus genome assembly, chromosome: 1.
OX359297.1:77234213-77234232
GTAGGCCTGGCCCACTATAAGAGGGGCTGC77234213TTGCCCTTCCTCACTCTTATTCTCTCACTCTCTTAGCTTCTCTCTCGCCC
Apodemus sylvaticus genome assembly, chromosome: 4.
OX359300.1:139855079-139855098
ATGTCCTGGACAAGGCAGTTCCAAAGACCA139855079TTGCCCTTCCTCACTCTTATTTAGTGTGCGTGCGTGCGTGTGTGTGTGTG
ZO__Ed0004O08.f ZO__Ed Zingiber officinale cDNA clone ZO__Ed0004O08 5', mRNA sequence.
DY359660.1:385-404
CCCCACGGCCGCTGCCGCACGCCGCGGTAC385TTGCCCTTCCTCACTCTTATTCTCCTCGTTTTCGGCGCCTTCGCCGCCGC
TSA: Cannabis sativa PK03683.1_1.CasaPuKu mRNA sequence.
JP450009.1:82-101
TCAATCTACTCACCAAAAATGAAGAATCAT82TTGCCCTTCCTCACTCTTATGTTTAGCTTCATCATGATCATGATCATGTG
Portevinia maculata genome assembly, chromosome: 2.
OX454526.1:308825035-308825054
AATTTTCTATTATATTTTTGACTAAATGAC308825035TTGCCCTTCCTCACTCTTATGTCGACAGCTGTAATATCTCAAAATTTTCG
ZO__Ed0004O08.r ZO__Ed Zingiber officinale cDNA clone ZO__Ed0004O08 3', mRNA sequence.
DY359661.1:222-241
GCGGCGGCGAAGGCGCCGAAAACGAGGAGA222ATAAGAGTGAGGAAGGGCAAGTACCGCGGCGTGCGGCAGCGGCCGTGGGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGCCCTTCCTCACTCTTAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCCCTTCCTCACTCTTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.227 | 0.218 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCCCTTCCTCACTCTTAT&k=0&no_gap=0&offset=0&limit=50
0.370 | 0.143 | search_minus_done; http://172.18.8.135:50400/match?q=ATAAGAGTGAGGAAGGGCAA&k=0&no_gap=0&offset=0&limit=45
0.371 | 0.001 | cgi_end;

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