GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-15 17:40:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 72270 from Patent EP2761003.
JC686489.1:241-260
GAAATTGATTTCAACGTGTATCTTTTCGTC241TTGCTCAAAAGTGTCGTTGCACCACACTCTCTCTCTCTCTCTCTCTCTCA
UDP96-003 AC- and AG-enriched peach leaf genomic libraries Prunus persica STS genomic clone peach-ac 4, sequence tagged site.
BV079690.1:29-48
AATTGATTTCAACGTGTATCTTTTCGTC29TTGCTCAAAAGTGTCGTTGCACCACACTCTCTCTCTCTCTCTCTCTCTCA
Prunus dulcis DNA, pseudomolecule Pd04.
AP019300.1:8904270-8904289
GAAATTGATTTCAACGTGTATCTTTTCGTC8904270TTGCTCAAAAGTGTCGTTGCACTACTCTCTCTCTCTCTCTCTCTCTCTCT
Capnocytophaga sputigena strain D1179 chromosome, complete genome.
CP022379.1:2255358-2255377
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2255358TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Capnocytophaga sputigena strain H4486 chromosome, complete genome.
CP022383.1:2454920-2454939
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2454920TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Capnocytophaga sputigena strain NCTC11097 genome assembly, chromosome: 1.
LR134489.1:2335540-2335559
TTCCCAAAGAGCGAGAGCCTTTTGTTTTGT2335540TTGCTCAAAAGTGTCGTTGCCCAGTTCTGTTTGGAGGTTCAATAAGGCTT
Capnocytophaga sputigena strain KC1668 chromosome, complete genome.
CP022385.1:1244199-1244218
AAGCCTTGTTGAATTTGCAAACAGAACTGG1244199GCAACGACACTTTTGAGCAAACCAAACAAAAGGCTCTCAATCTTTGGGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGCTCAAAAGTGTCGTTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCTCAAAAGTGTCGTTGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.207 | 0.198 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCTCAAAAGTGTCGTTGC&k=0&no_gap=0&offset=0&limit=50
0.308 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=GCAACGACACTTTTGAGCAA&k=0&no_gap=0&offset=0&limit=44
0.309 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).