GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 08:11:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:7388120-7388140
GGGAAAGAGAACTTCATATAAAATAGCAAA7388120TTGCTGGAAGAGAGACTCCAATGCATTCACTCTCACTAAAGTTTATAACAA
CS00-C1-102-107-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY672317.1:625-645
TAATAAAACTTTAAGTGAGAGTGGAATGCA625TTGGAGTCTCTCTTCCAGCAAATTTTCTATTTTATATGAAGTTCTCTTTTC
Citrus reshni phosphoenolpyruvate carboxylase gene, partial cds.
JX630067.1:370-390
TTGTTATAAACTTTAGTGAGAGTGAATGCA370TTGGAGTCTCTCTTCCAGCAATTTGCTATTTTATATGAAGTTCTCTTTCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGCTGGAAGAGAGACTCCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCTGGAAGAGAGACTCCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCTGGAAGAGAGACTCCAA&k=0&no_gap=0&offset=0&limit=50
0.198 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGAGTCTCTCTTCCAGCAA&k=0&no_gap=0&offset=0&limit=49
0.200 | 0.001 | cgi_end;

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