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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:20:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

VBL1_41_K22_E001.g1 Normalized cDNA library from cotyledon and young leaves of peanut Arachis hypogaea cDNA, mRNA sequence.
GO267127.1:312-331
TATTGTTATCCTCTTCTAGAGTATGTGTAT312TTGCTTGCGACTAAGCATCAATGTATACTCCAACAACATCTAATATTTTG
TSA: Arachis hypogaea CL8341Contig1.Arhy mRNA sequence.
EZ738075.1:249-268
TATTGTTATCCTCTTCTAGAGTATGTGTAT249TTGCTTGCGACTAAGCATCAATGTATACTCGAACAACATCTAATATTTTG
TSA: Arachis hypogaea Ahy.Unigene28697 mRNA sequence.
JR568438.1:35-54
TATTGTTATCCTCTTCTAGAGTATGTGTAT35TTGCTTGCGACTAAGCATCAATGTATACTCGAACAACATCTAATATTTTG
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:20476343-20476362
TATTGTTATCCTCTTCTAGAGTATGTGTAT20476343TTGCTTGCGACTAAGCATCAATGTATACTCGAACAACATCTAATATTTTG
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:22080621-22080640
TATTGTTATCCTCTTCTAGAGTATGTGTAT22080621TTGCTTGCGACTAAGCATCAATGTATACTCGAACAACATCTAATATTTTG
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:21174261-21174280
TATTGTTATCCTCTTCTAGAGTATGTGTAT21174261TTGCTTGCGACTAAGCATCAATGTATACTCGAACAACATCTAATATTTTG
C20L_31_H12_E002.g1 USDA-Tifton Peanut Library C20L Arachis hypogaea cDNA clone C20L-031_H12 5', mRNA sequence.
ES753675.1:225-244
CAAAATATTAGATGTTGTTCGAGTATACAT225TGATGCTTAGTCGCAAGCAAATACACATACTCTAGAAGAGGATAACAATA
Arachis hypogaea DNA, clone: 8iHA03B21, cultivar: YI-0311.
DE998500.1:461-480
CAAAATATTAGATGTTGTTCGAGTATACAT461TGATGCTTAGTCGCAAGCAAATACACATACTCTAGAAGAGGATAACAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGCTTGCGACTAAGCATCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCTTGCGACTAAGCATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.408 | 0.399 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCTTGCGACTAAGCATCA&k=0&no_gap=0&offset=0&limit=50
0.556 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TGATGCTTAGTCGCAAGCAA&k=0&no_gap=0&offset=0&limit=44
0.558 | 0.001 | cgi_end;

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