GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:14:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Accipiter gentilis genome assembly, chromosome: 4.
OV839364.1:41529446-41529465
GGGCACCATTAAAAATGACAGGTCTTTGAG41529446TTGCTTGGGATCTGCTTTCTCACGGCTCTGCTCCTTATGGAGACACTTAC
Hermetia illucens genome assembly, chromosome: 3.
LR899011.1:31212444-31212463
CTCGCTGGAGTTACTTATCCTAAGCACCTT31212444TTGCTTGGGATCTGCTTTCTTGCGTCCGATTTCTCTGGATATTACCACGC
Atherix ibis genome assembly, chromosome: 5.
OY282609.1:55485954-55485973
GTCGTATTTCAATCGATTTACTGTCTGACT55485954TTGCTTGGGATCTGCTTTCTCCCCATTTTAAGATTTCTAGAATTACGCAG
Onychomys torridus genome assembly, chromosome: 19.
LR877206.1:43419762-43419781
GTGATCAGTGAAAAGTTATGGGCTGTGTGC43419762AGAAAGCAGATCCCAAGCAATGCAATCAAATGCTAAAACAATGTGTGCTG
Onychomys arenicola genome assembly, chromosome: 19.
OX460365.1:46804253-46804272
GTGATCAGTGAAAAGTTATGGGCTGTGTGC46804253AGAAAGCAGATCCCAAGCAATGCAATCAAATGCTAAAACAATGTGTGCTG
Onychomys leucogaster genome assembly, chromosome: 19.
OX460389.1:36652451-36652470
GTGATCAGTGAAAAGTTATGGGCTGTGTGC36652451AGAAAGCAGATCCCAAGCAATGCAATCAAATGCTAAAACAATGTGTGCTG
Peromyscus eremicus genome assembly, chromosome: 8b.
OX460402.1:44567462-44567481
ACGATCAGTGAAAAGTTATGGGCTGTGTGC44567462AGAAAGCAGATCCCAAGCAACACAATCAAATGCTAAAAGAATGTGTGCTG
Onychomys leucogaster genome assembly, chromosome: 19.
OX460436.1:41585267-41585286
GTGATCAGTGAAAAGTTATGGGCTGTGTGC41585267AGAAAGCAGATCCCAAGCAATGCAATCAAATGCTAAAACAATGTGTGCTG
Onychomys arenicola genome assembly, chromosome: 19.
OX460460.1:45199255-45199274
GTGATCAGTGAAAAGTTATGGGCTGTGTGC45199255AGAAAGCAGATCCCAAGCAATGCAATCAAATGCTAAAACAATGTGTGCTG
Peromyscus eremicus genome assembly, chromosome: 8b.
OX460474.1:44964577-44964596
ACGATCAGTGAAAAGTTATGGGCTGTGTGC44964577AGAAAGCAGATCCCAAGCAACACAATCAAATGCTAAAAGAATGTGTGCTG
Onychomys torridus genome assembly, chromosome: 19.
OX460900.1:43419762-43419781
GTGATCAGTGAAAAGTTATGGGCTGTGTGC43419762AGAAAGCAGATCCCAAGCAATGCAATCAAATGCTAAAACAATGTGTGCTG
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:139787853-139787872
GAGTAGTTGCCAAATATTTATAGTGTTTTG139787853AGAAAGCAGATCCCAAGCAAAAAGCATAGTGCTACTTTAAGTCTATAATA
Pyrgus malvae genome assembly, chromosome: 2.
OU426948.1:25640528-25640547
ATCATATTATGTCACAGTGTATTCAAAACG25640528AGAAAGCAGATCCCAAGCAAGGGCAAATTGAAAGATTAGAATGTATCACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGCTTGGGATCTGCTTTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGCTTGGGATCTGCTTTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=TTGCTTGGGATCTGCTTTCT&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAAGCAGATCCCAAGCAA&k=0&no_gap=0&offset=0&limit=47
0.143 | 0.007 | cgi_end;

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