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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:53:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys torridus genome assembly, chromosome: 13.
LR877200.1:28454424-28454443
TATAGTAAGAGGAGAAAACATTGATGAGAC28454424TTGGAGGGAGACAGAGAGGATGGTGGGATTTTGCATCTCTGGCTCTCAAG
Heterocephalus glaber genome assembly, chromosome: 7.
OX090915.1:548482-548501
GATATTTTGCAAATGAGAAGGGGACCAAGA548482TTGGAGGGAGACAGAGAGGAAGTAAAAGAAATTAAGTAAAAGAAATTAAT
Heterocephalus glaber genome assembly, chromosome: 7.
OX090947.1:14558942-14558961
GATATTTTGCAAATGAGAAGGGGACCAAGA14558942TTGGAGGGAGACAGAGAGGAAGTAAAAGAAATTAAGTAAAAGAAATTAAT
Onychomys leucogaster genome assembly, chromosome: 13.
OX460383.1:28683190-28683209
TATAGTAAGAGGAGAAAACATTGATGAGAC28683190TTGGAGGGAGACAGAGAGGATGGTGGGATTTTGCATCTCTGGCTCTCAAG
Peromyscus eremicus genome assembly, chromosome: 19.
OX460413.1:28208949-28208968
TATAGTAAGAGGAGAAAACGGTAATGAGAC28208949TTGGAGGGAGACAGAGAGGATGGTGGGATTTTGCATCTCAGGCACTCAAG
Onychomys leucogaster genome assembly, chromosome: 13.
OX460430.1:28627784-28627803
TATAGTAAGAGGAGAAAACATTGATGAGAC28627784TTGGAGGGAGACAGAGAGGATGGTGGGATTTTGCATCTCTGGCTCTCAAG
Peromyscus eremicus genome assembly, chromosome: 19.
OX460485.1:28151033-28151052
TATAGTAAGAGGAGAAAACGGTAATGAGAC28151033TTGGAGGGAGACAGAGAGGATGGTGGGATTTTGCATCTCAGGCACTCAAG
Onychomys torridus genome assembly, chromosome: 13.
OX460894.1:28454424-28454443
TATAGTAAGAGGAGAAAACATTGATGAGAC28454424TTGGAGGGAGACAGAGAGGATGGTGGGATTTTGCATCTCTGGCTCTCAAG
Heterocephalus glaber genome assembly, chromosome: 7.
OZ001072.1:15182482-15182501
GATATTTTGCAAATGAGAAGGGGACCAAGA15182482TTGGAGGGAGACAGAGAGGAAGTAAAAGAAATTAAGTAAAAGAAATTAAT
Heterocephalus glaber genome assembly, chromosome: 7.
OZ001115.1:15463504-15463523
GATATTTTGCAAATGAGAAGGGGACCAAGA15463504TTGGAGGGAGACAGAGAGGAAGTAAAAGAAATTAAGTAAAAGAAATTAAT
Micromys minutus genome assembly, chromosome: 8.
OZ004788.1:26169490-26169509
TATAGTAAGTGGAGAAAGCATTATTGGGAC26169490TTGGAGGGAGACAGAGAGGACAGTGGCATTTGGCATCTCTGGCACTTGAT
Sylvilagus floridanus genome assembly, chromosome: 10.
OX463232.1:5611043-5611062
GTCCTGGATGCCCTGGGGGACAACTGGGGG5611043TTGGAGGGAGACAGAGAGGAAGCCAGGGGCGCAGGGACTGCGAGCTGTGA
Gallus gallus clone XXbac-68C5, complete sequence.
AC091708.2:39504-39523
TCTGATTCTGTTCTTGCCGAATTCCCTTTT39504TTGGAGGGAGACAGAGAGGAAACGGAAATATCCCTGAACATCTCTTTAGC
Anabas testudineus genome assembly, chromosome: 19.
LR132049.1:8818888-8818907
GCACAGCTCTGGGGCCGAGGATACCTGCAG8818888TTGGAGGGAGACAGAGAGGAGCATTTTGCACCAATAATCGTGCAAAAATG
Mobula hypostoma genome assembly, chromosome: 12.
OY992603.1:5503000-5503019
GGAAGCGGAGACGGTGACGTGGAGAAAGTC5503000TTGGAGGGAGACAGAGAGGAATGAACTAAGAACATGAGTTGCAAATTCCT
Embrapa_Musa_ABB_NonStressed_Cachaco_OM26TF Embrapa_Musa_Cachaco_ABB_NonStressed Musa ABB Group cDNA, mRNA sequence.
FL659694.1:6-25
GGGAG6TTGGAGGGAGACAGAGAGGATGCATTCGTTTGCGTACCGCCTGAACACCC
Embrapa_Musa_ABB_Stressed_Cachaco_D273TFB Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL660025.1:19-38
GATCGCCGGAGAGTGGAG19TTGGAGGGAGACAGAGAGGATGCATTCGTTTGCGTACCGCCTGAACACCC
Embrapa_Musa_ABB_Stressed_Cachaco_E075TF Embrapa_Musa_Cachaco_ABB_Stressed Musa ABB Group cDNA, mRNA sequence.
FL662979.1:3-22
GG3TTGGAGGGAGACAGAGAGGATGCATTCGTTCGCGTACCGCCTGAACAACC
MA4LIMFES012B_MA4LIMFES012B_A04_.b MA4LIMFES Musa acuminata cDNA clone MA4LIMFES012B_MA4LIMFES012B_A04_.b 5', mRNA sequence.
JK535220.1:73-92
GCGGCCGCCATACATCGCCGGAGAGTGGAG73TTGGAGGGAGACAGAGAGGATGCATTCGTTCGCGTACCGCCTGAACACCC
VUH2-71O19TR VUUBBa (VUH2) Vigna unguiculata genomic clone VUH2-71O19, genomic survey sequence.
EI936460.1:508-527
TTCCTTCCCCTCTCTATCCCTCAACGCTGA508TTGGAGGGAGACAGAGAGGATGAATTCAAATGGATTAGAGTGTGTAGCTT
Vigna unguiculata cultivar Xiabao 2 chromosome Vu06.
CP039345.1:24601721-24601740
TTCCTTCCCATCTCTATCCCTCAACGTTGA24601721TTGGAGGGAGACAGAGAGGATAAATTCAAGTGGATTAGAGTGTGAAGCTT
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:18873392-18873411
TTCCTTCCCCTCTCTATCCCTCAACGTTGA18873392TTGGAGGGAGACAGAGAGGATTAATTCAAGTGGATTAAAGTGTGAAGCTT
Grimontia kaedaensis strain 020920N chromosome I, complete sequence.
CP082275.1:3439567-3439586
ATCGCTCCTTGGTTGGCAAAATCTCATACT3439567TTGGAGGGAGACAGAGAGGAGGATAATGCTGCTTTCACTTCAGTATCTGA
Muscardinus avellanarius genome assembly, chromosome: 8.
OY726565.1:6856502-6856521
TTCTTCATATTTACACGCACCTGCTTCCTT6856502TCCTCTCTGTCTCCCTCCAATATTTAAGGACAATAACATCCTGACATTTT
Pipistrellus pipistrellus genome assembly, chromosome: 15.
LR862371.1:2355233-2355252
CAACTTCCTCCCGGACCTGCCTTCTAGAGC2355233TCCTCTCTGTCTCCCTCCAATGGTGCAATTCTTTAGGTCTCTCTCCCTCT
Pipistrellus pygmaeus genome assembly, chromosome: 17.
OX465319.1:3566532-3566551
CAACTTCCTCCCGGACCCGCCTTTTAGAGC3566532TCCTCTCTGTCTCCCTCCAATGGTGCAATTCTTTAGGTCTCTCTCCCTCT
Gallus gallus BAC clone CH261-117C7 from chromosome unknown, complete sequence.
AC163701.4:180753-180772
GCTAAAGAGATGTTCAGGGATATTTCCGTT180753TCCTCTCTGTCTCCCTCCAAAAAAGGGAATTCGGCAAGAACAGAATCAGA
Gallus gallus breed Huxu chromosome 1.
CP100555.1:26871490-26871509
GCTAAAGAGATGTTTAGGGATATTTCTGTT26871490TCCTCTCTGTCTCCCTCCAAAAAAGGGAATTCGGCAAGAACAGAATCAGA
Solea senegalensis genome assembly, chromosome: G.
OW185638.1:20790613-20790632
TCCCTCCGCTAAGCCTCTACCAAGCCTTCT20790613TCCTCTCTGTCTCCCTCCAAACCATTCATCATCTCTTCTTTACTGCTGTG
Borostomias antarcticus genome assembly, chromosome: 23.
OX465226.1:12347598-12347617
TCCCTCCCTCCCCTCGCTCCCTGCTTCTCG12347598TCCTCTCTGTCTCCCTCCAACCCCCCACCCCACCCCCCCCTTTCCTCCCT
Raja brachyura genome assembly, chromosome: 8.
OY740788.1:27419618-27419637
CGTGTCCGTCTCCGCCTCCCGACCCTGCCC27419618TCCTCTCTGTCTCCCTCCAAGGTGACCACCGCCCCCGGCTCTGTTTTCCT
Sardina pilchardus genome assembly, chromosome: 24.
OY974109.1:26861874-26861893
ACGGATTTGCATGTGAGATCGAATGCCCAT26861874TCCTCTCTGTCTCCCTCCAAAGGCATGGCGGTAGATTTATGTAGTGTCTG
VUH2-35I1TR VUUBBa (VUH2) Vigna unguiculata genomic clone VUH2-35I1, genomic survey sequence.
EI907441.1:22-41
ACTCTAATCCACTTGAATGCA22TCCTCTCTGTCTCCCTCCAATCAACGTTAACGGATAGAGAGGGGAAGGAA
Loxodonta africana clone VMRC15-358C19, WORKING DRAFT SEQUENCE, 5 ordered pieces.
AC175811.2:31124-31143
GTAGGTCCAGCCAACCTCTGCACAGCCCCC31124TCCTCTCTGTCTCCCTCCAATAAAGACCAGCCCTGAGGTTCTGCACAGGA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M009H21, *** SEQUENCING IN PROGRESS ***, 63 unordered pieces.
AC271569.1:18059-18078
AAGCTTCACACTCTAATCCACTTGAATTTA18059TCCTCTCTGTCTCCCTCCAATCAACGTTGAGGGATAGAGATGGGAAGGAA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M022N02, *** SEQUENCING IN PROGRESS ***, 56 unordered pieces.
AC272395.1:199853-199872
AAGCTACACACTCTAATCCATTTGAATTCA199853TCCTCTCTGTCTCCCTCCAATCAGCGTTGAGGGATAGAGAGGGGAAGGAA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:20922351-20922370
AAGCTACACACTCTAATCCATTTGAATTCA20922351TCCTCTCTGTCTCCCTCCAATCAGCGTTGAGGGATAGAGAGGGGAAGGAA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:27631469-27631488
AAGCTTCACACTCTAATCCACTTGAATGCA27631469TCCTCTCTGTCTCCCTCCAATCAACGTTAACGGATAGAGAGGGGAAGGAA
Musa troglodytarum cultivar karat chromosome 2.
CP097504.1:43356900-43356919
GGGTGTTCAGGCGGTACGCAAACGAATGCA43356900TCCTCTCTGTCTCCCTCCAACTCCACTCTCCGGCGGTGTGATGGCGGCCG
Brassica napus cultivar Xiang5A chromosome 17.
CP123892.1:41058913-41058932
TCTAACATGACAGCCATAAGCCAACTCATC41058913TCCTCTCTGTCTCCCTCCAACACATGCTTCATTGTGGCTCCTACCTAATA
Musa acuminata subsp. malaccensis isolate AA chromosome 2.
CP126371.1:25772514-25772533
GGGTGTTCAGGCGGTACGCGAACGAATGCA25772514TCCTCTCTGTCTCCCTCCAACTCCACTGTCCGGCGATGTGATGGCGGCCG
Musa acuminata subsp. malaccensis isolate AA chromosome 13.
CP126382.1:25877861-25877880
GGGTGTTCAGGCGGTACGCGAACGAATGCA25877861TCCTCTCTGTCTCCCTCCAACTCCACTGTCCGGCGATGTGATGGCGGCCG
Brassica napus genome assembly, chromosome: A05.
HG994359.1:37068641-37068660
TCTAACATGACAGCCATAAGCCAACTCATC37068641TCCTCTCTGTCTCCCTCCAACACATGCTTCATTGTGGCTCCTACCTAATA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A02.
HG996467.1:24411627-24411646
GGGTGTTCAGGCGGTACGCGAACGAATGCA24411627TCCTCTCTGTCTCCCTCCAACTCCACTGTCCGGCGATGTGATGGCGGCCG
Musa schizocarpa genome assembly, chromosome: S02.
LS990916.1:26377881-26377900
GGGTGTTCAGGCGGTACGCGAACGAATGCA26377881TCCTCTCTGTCTCCCTCCAACTACACTCTCCGGCGATGTGATGGCGGCCG
Avena insularis genome assembly, chromosome: 4D.
OU342348.1:305317930-305317949
CCTCCTCAAACCCTAGCCGCCCTGCTGCCT305317930TCCTCTCTGTCTCCCTCCAAACTGCGTGTAGGCGAAGCCCTGCTGCAGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGGAGGGAGACAGAGAGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGAGGGAGACAGAGAGGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.518 | 0.510 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGAGGGAGACAGAGAGGA&k=0&no_gap=0&offset=0&limit=50
0.666 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTCTCTGTCTCCCTCCAA&k=0&no_gap=0&offset=0&limit=27
0.681 | 0.015 | cgi_end;

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