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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:01:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arachis hypogaea cultivar Shitouqi chromosome B01.
CP030993.1:15082704-15082723
GTTTTTTCGATATCACAGATTTAGTAATTA15082704TTGGATCGTTTGTGAGTTTGTTTTTGTAGTCGTTTTGTGAATTTAGGTAG
Arachis ipaensis cultivar K30076 chromosome 01.
CP049892.1:15640911-15640930
GTTTTTTCGATATCACAGATTTAGTAATTA15640911TTGGATCGTTTGTGAGTTTGTTTTTGTAGTCGTTTTGTGAATTTAGGTAG
Fagus sylvatica genome assembly, chromosome: 6.
OU015766.1:21508250-21508269
TGTCCAAAAAAAAAAAAAACTACTTAAATT21508250TTGGATCGTTTGTGAGTTTGAGTATATATGAGAGAGAGAGAGTATTTTGT
Juncus effusus genome assembly, chromosome: 4.
OX326977.1:4069437-4069456
GAAGGCGGGAAGAATGAAAATGGAATGAGT4069437TTGGATCGTTTGTGAGTTTGGTTTGGGATTGTCGCGCCGCGCTAAATTCT
1_Tdi_b3v08.
OA564667.1:9035-9054
ATCGCAACTAAAATAAAATTAAATAATATA9035TTGGATCGTTTGTGAGTTTGGTAAATTTCACTGCACGCTTTAAATCGAAG
1_Tps_b3v08.
OD003453.1:33319-33338
ATCGCAACTAAAATAAAATAAAATAATATA33319TTGGATCGTTTGTGAGTTTGGTAAATTTCACTGCACGCTTTAAATCGAAG
JP 2016533752-A/283288: OLIGONUCLEOTIDE PROBES AND USES THEREOF.
LV237890.1:5-24
TTAA5CAAACTCACAAACGATCCAATCCACA
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:1030342-1030361
AAAATTAAATTCACAAAACGACTCCAAAAA1030342CAAACTCACAAACGATCCAATAATTACTAAATCTGTGATATCGAAAAAAA
Ischnura elegans genome assembly, chromosome: 3.
OV121102.1:36452427-36452446
TGATTATTAAATTATAATCACAATAATCAG36452427CAAACTCACAAACGATCCAAGAAAGATAAGCAACTGTCTTCAGTATTGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGGATCGTTTGTGAGTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGATCGTTTGTGAGTTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.243 | 0.235 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGATCGTTTGTGAGTTTG&k=0&no_gap=0&offset=0&limit=50
0.385 | 0.142 | search_minus_done; http://172.18.8.135:50400/match?q=CAAACTCACAAACGATCCAA&k=0&no_gap=0&offset=0&limit=44
0.387 | 0.002 | cgi_end;

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