GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-16 18:22:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Heterocephalus glaber genome assembly, chromosome: 29.
OX090937.1:14486883-14486902
ATGCTTGAGATGAGAACTGTCACATGAGAC14486883TTGGATTAGACATTGCAACATTATGCAGAAATACTTGTGCAAGGTTGTGG
Heterocephalus glaber genome assembly, chromosome: 29.
OX090969.1:16294448-16294467
ATGCTTGAGATGAGAACTGTCACATGAGAC16294448TTGGATTAGACATTGCAACATTATGCAGAAATACTTGTGCAAGGTTGTGG
Heterocephalus glaber genome assembly, chromosome: 29.
OZ001094.1:9358883-9358902
ATGCTTGAGATGAGAACTGTCACATGAGAC9358883TTGGATTAGACATTGCAACATTATGCAGAAATACTTGTGCAAGGTTGTGG
Heterocephalus glaber genome assembly, chromosome: 29.
OZ001137.1:10073608-10073627
ATGCTTGAGATGAGAACTGTCACATGAGAC10073608TTGGATTAGACATTGCAACATTATGCAGAAATACTTGTGCAAGGTTGTGG
Ovis canadensis canadensis isolate 43U chromosome 10 sequence.
CP011895.1:48579296-48579315
ACTGAACCGAACTGAGGAGAGTTCAAAATA48579296TTGGATTAGACATTGCAACAAAAATTATAATAAACATAAAAAGTAAATCA
Capricornis sumatraensis isolate serow.1 chromosome 12.
CP135638.1:57632707-57632726
ACTGAACTAAACTGAGGAGAGTTCAAAATA57632707TTGGATTAGACATTGCAACAAAAATTATAATAAACATAAAAAGTAAATCA
Cervus elaphus genome assembly, chromosome: 30.
OU343107.1:47444856-47444875
ACTGAGCTGAACTGAGGAGGGTTCAAAATA47444856TTGGATTAGACATTGCAACAAAAATTATAATAAACATAAAATGTAGATCA
Somateria mollissima genome assembly, chromosome: 1.
OX598302.1:96930474-96930493
TTTCCTGCAATAATATTATAAGTGCTGAGC96930474TTGGATTAGACATTGCAACAAATTTTCTAATGGCATGGGTGTTTAAATAA
Somateria mollissima genome assembly, chromosome: 1.
OX598690.1:98602259-98602278
TTTCCTGCAATAATATTATAAGTGCTGAGC98602259TTGGATTAGACATTGCAACAAATTTTCTAATGGCATGGGTGTTTAAATAA
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:6328963-6328982
GGTTAGCTGCATTCTTTTCAATGTTAATTC6328963TTGGATTAGACATTGCAACACAAGCACAATATATACGTCCTGTGGGTCAA
Oxycera nigricornis genome assembly, chromosome: 5.
OZ012663.1:37731444-37731463
CACATTTTTTTTTATCTTGATTAAAATGTG37731444TTGGATTAGACATTGCAACAGTCAGACAATTCAAGTTACAGTAAATTATT
Mobula hypostoma genome assembly, chromosome: 1.
OY992592.1:2393643-2393662
GCCTGCTGAGTTCCTCCAGCATTTTGTGTG2393643TGTTGCAATGTCTAATCCAATGTACTACCTCATCTTGAATGTCGAGTGAC
Pieris napi genome assembly, chromosome: 11.
FR997705.1:8908502-8908521
ATAATATTTAATATTACAATATTAAAATAT8908502TGTTGCAATGTCTAATCCAAAGATGGTAATTGTTCTTACTTTTTCTTATG
Pieris napi genome assembly, chromosome: 11.
HG993174.1:8803008-8803027
TTAATATTTAATATTATAATATTAAAATAT8803008TGTTGCAATGTCTAATCCAAAGATGGTTATTGTTCTTACTTTTTCTTATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGGATTAGACATTGCAACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGATTAGACATTGCAACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.118 | 0.109 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGATTAGACATTGCAACA&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTGCAATGTCTAATCCAA&k=0&no_gap=0&offset=0&limit=39
0.152 | 0.002 | cgi_end;

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