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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 15:47:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

GM830009A23F04 Gm-r1083 Glycine max cDNA clone Gm-r1083-3320 3', mRNA sequence.
BI969881.1:125-144
TGCCCCCCTCAAAATTACAGAATGAAACCA125TTGGCAATGGCTCTATTGGTATTGAAATGGGTAGTTTCGTACACAGGCAA
UCRVU04_CCNI7848_g1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI7848.g1, mRNA sequence.
FG823666.1:128-147
TTTCACCTTCAAAATTACAGAATGAAGCCA128TTGGCAATGGCTCTATTGGTACTGAAATGGGTAGTTTCATACACAGGTAA
UCRVU05_CCNN20768_g1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN20768.g1, mRNA sequence.
FG856587.1:128-147
TTTCACCTTCAAAATTACAGAATGAAGCCA128TTGGCAATGGCTCTATTGGTACTGAAATGGGTAGTTTCATACACAGGTAA
vsu-ars_034199_LI15contig_12525 VSU-ARS-L15 Phaseolus acutifolius cDNA, mRNA sequence.
HO809166.1:19-38
AATTACAGAATGAAGCCA19TTGGCAATGGCTCTATTGGTATTGAAATGGGTAGTTTCATACACAGGTAA
GMW2-31I6a.g1 GMW2 Glycine max genomic, genomic survey sequence.
CZ501648.1:541-560
CCCCCCCCTCAAAATTACAGAATGAAGCCA541TTGGCAATGGCTCTATTGGTATTGAAATGGGTAGTTTCATACACAGGCAA
GM_WBb0031I06.r GM_WBb Glycine max genomic clone GM_WBb0031I06 3', genomic survey sequence.
ED693311.1:493-512
CCCCCCCCTCAAAATTACAGAATGAAGCCA493TTGGCAATGGCTCTATTGGTATTGAAATGGGTAGTTTCATACACAGGCAA
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M003H16, *** SEQUENCING IN PROGRESS ***, 37 unordered pieces.
AC272457.1:57247-57266
TTTCACCTTCAAAATTACAGAATGAAGCCA57247TTGGCAATGGCTCTATTGGTACTGAAATGGGTAGTTTCATACACAGGTAA
Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
AP015042.1:34289436-34289455
TTTCCCCTTCAAAATTACAGAATGAAGCCA34289436TTGGCAATGGCTCTATTGGTATTGAAATGGGTAGTTTCATACACAGGTAA
Vigna unguiculata cultivar Xiabao 2 chromosome Vu10.
CP039352.1:4346610-4346629
TTTCACCTTCAAAATTACAGAATGAAGCCA4346610TTGGCAATGGCTCTATTGGTACTGAAATGGGTAGTTTCATACACAGGTAA
Sherardia arvensis genome assembly, chromosome: 6.
OX415240.1:40168295-40168314
AAAATAATAACAAATTACAAAATCAAGCCC40168295TTGGCAATGGCTCTATTGGTTCCAAGATGAGTGGTTTCATACACAGGCAA
Sequence 6816 from patent US 7569389.
GP677361.1:1324-1343
TTGCCTGTGTACGAAACTACCCATTTCAAT1324ACCAATAGAGCCATTGCCAATGGTTTCATTCTGTAATTTTGAGGGGGGCA
Sequence 5147 from patent US 8183436.
GZ318204.1:1324-1343
TTGCCTGTGTACGAAACTACCCATTTCAAT1324ACCAATAGAGCCATTGCCAATGGTTTCATTCTGTAATTTTGAGGGGGGCA
Sequence 24028 from patent US 9012723.
HK587682.1:1261-1280
TTGCCTGTGTACGAAACTACCCATTTCAAT1261ACCAATAGAGCCATTGCCAATGGTTTCATTCTGTAA
Sequence 15797 from patent US 9029636.
HK924860.1:1258-1277
TTGCCTGTGTATGAAACTACCCATTTCAAT1258ACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAA
sas58d05.y1 Gm-c1023 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1023-4786 5' similar to TR:Q9SLL2 Q9SLL2 F20D21.2 PROTEIN, mRNA sequence.
BU760780.1:153-172
TTGCCTGTGTACGAAACTACCCATTTCAAT153ACCAATAGAGCCATTGCCAATGGTTTCATTCTGTAATTTTGAGGGGGGCA
Pv054B_M13R_D02.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE694604.1:719-738
TTACCTGTGTATGAAACTACCCATTTCAAT719ACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAATTTTGAGGGGAAAA
MOPDW41TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF546435.1:533-552
TTACCTGTGTATGAAACTACCCATTTCAGT533ACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAATTTTGAAGGTGAAA
Glycine max cultivar Williams 82 chromosome 7.
CP126432.1:3028593-3028612
TTGCCTGTGTATGAAACTACCCATTTCAAT3028593ACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAATTTTGAGGGGGGGG
Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:492029-492048
TTGCCTGTGTACGAAACTACCCATTTCAAT492029ACCAATAGAGCCATTGCCAATGGTTTCATTCTGTAATTTTGAGGGGGGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGGCAATGGCTCTATTGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGCAATGGCTCTATTGGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.340 | 1.331 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGCAATGGCTCTATTGGT&k=0&no_gap=0&offset=0&limit=50
2.488 | 1.149 | search_minus_done; http://172.18.8.135:50400/match?q=ACCAATAGAGCCATTGCCAA&k=0&no_gap=0&offset=0&limit=40
2.494 | 0.006 | cgi_end;

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