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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-14 18:47:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS1A205TR RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EW718455.1:608-628
ATATCTTGGACATCTCTTAAAAAACTCGGG608TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RS1A205JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EW718718.1:608-628
ATATCTTGGACATCTCTTAAAAAACTCGGG608TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RR2CK82JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EX760797.1:609-629
ATATCTTGGACATCTCTTAAAGAACTCGGG609TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RR4E591JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
EY920360.1:530-550
ATATCTTGGACATCTCTTAAAAAACTCGGG530TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RS1DM28JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
EY927403.1:627-647
ATATCTTGGACATCTCTTAAAAAACTCGGG627TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RR3F494JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
FD546171.1:599-619
ATATCTTGGACATCTCTTAAAAAACTCGGG599TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RS2EX10JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD573252.1:136-156
ATCAATATTAGTAAAGTGAGTCACCTCGGG136TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RS2FZ01JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD575855.1:630-650
ATATCTTGGACATCTCTTAAAAAACTCGGG630TTGGGCGTTAGCATAGCAAGAACGGCATTTGGGCCCGTGGGTGTCTCCGCG
RR2B376TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV538234.1:389-409
CGCGGAGACACCCACGGGCCCAAATGCCGT389TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCATATATA
RS1A205TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EW713776.1:535-555
CGCGGAGACACCCACGGGCCCAAATGCCGT535TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RS1A205TV RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EW713869.1:486-506
CGCGGAGACACCCACGGGCCCAAATGCCGT486TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RR2CK82TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EX757144.1:412-432
CGCGGAGACACCCACGGGCCCAAATGCCGT412TCTTGCTATGCTAACGCCCAACCCGAGTTCTTTAAGAGATGTCCAAGATAT
RR4DQ10TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EY923365.1:411-431
CGCGGAGACACCCACGGGCCCAAATGCCGT411TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RR4E591TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EY924750.1:411-431
CGCGGAGACACCCACGGGCCCAAATGCCGT411TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RS1DM28TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
EY931443.1:411-431
CGCGGAGACACCCACGGGCCCAAATGCCGT411TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RR3F494TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD550197.1:411-431
CGCGGAGACACCCACGGGCCCAAATGCCGT411TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RS1EH15TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD560814.1:411-431
CGCGGAGACACCCACGGGCCCAAATGCCGT411TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RS2EX10TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD568968.1:409-429
CGCGGAGACACCCACGGGCCCAAATGCCGT409TCTTGCTATGCTAACGCCCAACCCGAGGTGACTCACTTTACTAATATTGAT
RS2FZ01TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD572162.1:411-431
CGCGGAGACACCCACGGGCCCAAATGCCGT411TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RS3EY92TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
FD578231.1:166-186
CGCGGAGACACTCACGGGCCCAAATGCCGT166TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RS1G613TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD938729.1:411-431
CGCGGAGACACCCACGGGCCCAAATGCCGT411TCTTGCTATGCTAACGCCCAACCCGAGTTTTTTAAGAGATGTCCAAGATAT
RR2H613TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
FD973824.1:409-429
CGCGGAGACACCCACGGGCCCAAATGCCGT409TCTTGCTATGCTAACGCCCAACCCGAGTTCTTTAAGAGATGTCCAAGATAT
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:6571569-6571589
CGCGGAGACACCCACGGGCCCAAATGCCGT6571569TCTTGCTATGCTAACGCCCAACCCGAGGTGACTCACTTTACTAATATTGAT
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:6571569-6571589
CGCGGAGACACCCACGGGCCCAAATGCCGT6571569TCTTGCTATGCTAACGCCCAACCCGAGGTGACTCACTTTACTAATATTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGGGCGTTAGCATAGCAAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGGCGTTAGCATAGCAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.630 | 0.622 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGGCGTTAGCATAGCAAGA&k=0&no_gap=0&offset=0&limit=50
1.618 | 0.988 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTGCTATGCTAACGCCCAA&k=0&no_gap=0&offset=0&limit=42
1.629 | 0.010 | cgi_end;

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