GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:20:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig01932.
LM617665.1:558-581
TGTCCCATGATAACCAGACACATCATTTGT558TTGGTACAACCTGAAATCGACGCCCCATTTAATTAGATTTTGTGATTCCATGGA
TSA: Elaeis guineensis isotig05994.Elguifruit mRNA sequence.
JO093246.1:45-68
TGTCCCATGATAACCAGACACATCATTTGT45TTGGTACAACCTGAAATCGACGCCCCATTTAATTAGATTTTGTGATTCCATGGA
TSA: Elaeis guineensis isotig05995.Elguifruit mRNA sequence.
JO093247.1:36-59
TGTCCCATGATAACCAGACACATCATTTGT36TTGGTACAACCTGAAATCGACGCCCCATTTAATTAGATTTTGTGATTCCATGGA
pOP-CNIP00282_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00282 5', mRNA sequence.
EY404530.1:115-138
TCCATGGAATCACAAAATCTAATTAAATGG115GGCGTCGATTTCAGGTTGTACCAAACAAATGATGTGTCTGGTTATCATGGGACA
pOP-EO03767_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO03767 5', mRNA sequence.
EY413643.1:468-491
TCCATGGAATCACAAAATCTAATTTAATGG468GGCGTCGATTTCAGGTTGTACCAAAC
Elaeis guineensis clone estEgSNP24 gibberellin 2-beta-dioxygenase (GA2ox) mRNA, complete cds.
JX438714.1:2056-2079
TCCATGGAATCACAAAATCTAATTAAATGG2056GGCGTCGATTTCAGGTTGTACCAAACAAATGATGTGTCTGGTTATCATGGGACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGGTACAACCTGAAATCGACGCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGTACAACCTGAAATCGACGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.232 | 0.223 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTACAACCTGAAATCGACGCC&k=0&no_gap=0&offset=0&limit=50
0.448 | 0.216 | search_minus_done; http://172.18.8.135:50400/match?q=GGCGTCGATTTCAGGTTGTACCAA&k=0&no_gap=0&offset=0&limit=47
0.450 | 0.002 | cgi_end;

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