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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:48:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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E4309 Chinese cabbage etiolated seedling library Brassica rapa subsp. pekinensis cDNA clone E4309, mRNA sequence.
BQ791397.1:217-236
ACGAACGAGAAGCAATCCTTTTGAAACAGT217TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
51ETGS4H_RP_002_G04_02SEP2004_020 Germinating seeds 4h Brassica napus cDNA 5', mRNA sequence.
CX280713.1:193-212
TCAGTTCGATACCAACTACACGCAATCCTT193TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica oleracea var. viridis mRNA, clone: KALE-011O13, 5' end sequence.
DK460104.1:195-214
TCAGTTCGATACGAACTAGACGCAATCCTT195TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica oleracea var. viridis mRNA, clone: KALE-014C01, 5' end sequence.
DK460954.1:191-210
TCAGTTCGATACGAACTAGACGCAATCCTT191TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica oleracea var. viridis mRNA, clone: KALE-038O14, 5' end sequence.
DK470425.1:130-149
TCAGTTCGATACGAACGAGAAGCAATCCTT130TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica oleracea var. viridis mRNA, clone: KALE-089L17, 5' end sequence.
DK489862.1:191-210
TCAGTTCGATACGAACGAGAAGCAATCCTT191TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica oleracea var. viridis mRNA, clone: KALE-133F13, 5' end sequence.
DK506546.1:105-124
TCAGTTCGATACGAACTAGACGCAATCCTT105TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica oleracea var. viridis mRNA, clone: KALE-150I19, 5' end sequence.
DK513113.1:195-214
TCAGTTCGATACGAACGAGAAGCAATCCTT195TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
5ETGS9H_UP_014_H09_05FEB2005_065 Brassica napus 5ETGS9h Brassica napus cDNA 5', mRNA sequence.
EE436461.1:188-207
TCAGTTCGATACGAACTAGACGCAATCCTT188TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
6ETGS6H_UP_018_E10_03FEB2005_072 Brassica napus 6ETGS6h Brassica napus cDNA 5', mRNA sequence.
EE440659.1:195-214
TCAGTTCGATACGAACTAGACGCAATCCTT195TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
38RDBRM_UP_054_D02_07DEC2005_010 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
EE527709.1:192-211
TCAGTTCGATACGAACGAGAAGCAATCCTT192TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
EST2843 3-9 DAP Brassica Napus seed cDNA library Brassica napus cDNA clone B119F091, mRNA sequence.
EL625337.1:226-245
ACGAACGAGAAGCAATCCTTTTGAAACAGT226TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BNARO5GH_T3_005_A09_29NOV2006_079 Brassica napus BNARO5GH Brassica napus cDNA 5', mRNA sequence.
ES905637.1:209-228
ACGAACGAGAAGCAATCCTTTTGAAACAGT209TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BNARO5GH_T3_023_E06_01DEC2006_040 Brassica napus BNARO5GH Brassica napus cDNA 5', mRNA sequence.
ES907331.1:129-148
ACGAACGAGAAGCAATCCTTTTGAAACAGT129TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BNARO5GH_T3_003_H09_29NOV2006_065 Brassica napus BNARO5GH Brassica napus cDNA 5', mRNA sequence.
ES907810.1:191-210
TCAGTTCGATACGAACGAGAAGCAATCCTT191TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BNARO6GH_T3_003_A06_6DEC2006_048 Brassica napus BNARO6GH Brassica napus cDNA 5', mRNA sequence.
ES908570.1:210-229
ACGAACGAGAAGCAATCCTTTTGAAACAGT210TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BNARO6GH_T3_013_C08_07DEC2006_060 Brassica napus BNARO6GH Brassica napus cDNA 5', mRNA sequence.
ES909913.1:152-171
TCAGTTCGATACGAACTAGACGCAATCCTT152TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
39RDBRT_UP_086_F02_24JAN2006_006 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
ES936708.1:215-234
TCAGTTCGATACGAACGAGAAGCAATCCTT215TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BNAEN1GH_UP_061_C06_22JUL2006_044 Brassica napus BNAEN1GH Brassica napus cDNA 5', mRNA sequence.
ES990936.1:225-244
ACGAACGAGAAGCAATCCTTTTGAAACAGT225TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
0085913 Brassica napus Bud library Brassica napus cDNA, mRNA sequence.
EV162051.1:242-261
ACGAACGAGAAGCAATCCTTTTGAAACAGT242TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
0086053 Brassica napus Bud library Brassica napus cDNA, mRNA sequence.
EV162191.1:240-259
ACGAACGAGAAGCAATCCTTTTGAAACAGT240TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
0090443 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV192960.1:254-273
ACGAACGAGAAGCAATCCTTTTGAAACAGT254TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
0092570 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV195084.1:70-89
GGTTGTGGTTGTTTGAAAGTTTGAAACAGT70TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BR081410 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-011C06 5', mRNA sequence.
EX095120.1:213-232
TCAGTTCGATACGAACGAGAAGCAATCCTT213TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BR081778 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-017H11 5', mRNA sequence.
EX095488.1:218-237
TCAGTTCGATACGAACGAGAAGCAATCCTT218TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BN18DYSC_UP_122_H10_1APR2008_066 BN18DYSC Brassica napus cDNA 5', mRNA sequence.
FG563237.1:229-248
ACGAACGAGAAGCAATCCTTTTGAAACAGT229TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
BN18DYSC_UP_131_D04_3APR2008_026 BN18DYSC Brassica napus cDNA 5', mRNA sequence.
FG563980.1:232-251
ACGAACGAGAAGCAATCCTTTTGAAACAGT232TTGGTCCTGAGACGATGACGATCACTTCAGACATCTCTGTCCAAAACGAC
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF36D03, 5'-end sequence.
FY419965.1:230-249
TCAGTTCGATACGAACGAGAAGCAATCCTT230TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF40P04, 5'-end sequence.
FY421689.1:222-241
TCAGTTCGATACGAACGAGAAGCAATCCTT222TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_732.
FX693794.1:77-96
TCAGTTCGATACGAACGAGAAGCAATCCTT77TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_2196.
FX726845.1:55-74
ACGAACGAGAAGCAATCCTTTTGAAACAGT55TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB073E19, complete sequence.
AC189457.2:57780-57799
TTTTTCTATGTTGTGGTTGTTTGAAACAGT57780TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:11126496-11126515
TTTTTCTATGTTGTGGTTGTTTGAAACAGT11126496TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
B.oleracea putative imbibition protein mRNA.
X79330.1:161-180
TCAGTTCGATACGAACTAGACGCAATCCTT161TTGGTCCTGAGACGATGACGATCACTTCAAACATCTCTGTCCAAAACGAC
KBrH112G16F Brassica rapa BAC library KBrH Brassica rapa genomic clone KBrH112G16, genomic survey sequence.
DU126807.1:205-224
GTCGTTTTGGACAGAGATGTTTGAAGTGAT205CGTCATCGTCTCAGGACCAAACTGTTTCAAACTTTCAAACAACCACAACA
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:60592585-60592604
GTCGTTTTGGACAGAGATGTTTGAAGTGAT60592585CGTCATCGTCTCAGGACCAAACTGTTTCAAACTTTCAAACAACCACAACA
Brassica napus genome assembly, chromosome: A09.
HG994363.1:44385634-44385653
GTCGTTTTGGACAGAGATGTTTGAAGTGAT44385634CGTCATCGTCTCAGGACCAAACTGTTTCAAACTTTCAAACAACCACAACA
Brassica napus genome assembly, chromosome: C08.
HG994372.1:30595487-30595506
GTCGTTTTGGACAGAGATGTTTGAAGTGAT30595487CGTCATCGTCTCAGGACCAAACTGTTTCAAACAACCACAACATAGAAAAA
Brassica rapa genome, scaffold: A09.
LR031568.1:48722516-48722535
GTCGTTTTGGACAGAGATGTTTGAAGTGAT48722516CGTCATCGTCTCAGGACCAAACTGTTTCAAACTTTCAAACAACCACAACA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:39882196-39882215
GTCGTTTTGGACAGAGATGTTTGAAGTGAT39882196CGTCATCGTCTCAGGACCAAACTGTTTCAAACAACCACAACATAGAAAAA
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:59189603-59189622
GTCGTTTTGGACAGAGATGTTTGAAGTGAT59189603CGTCATCGTCTCAGGACCAAACTGTTTCAAACTTTCAAACAACCACAACA
Eristalis pertinax genome assembly, chromosome: 4.
OU026148.1:6870435-6870454
TGCAAAAAGGATTCTCACCGTCCTCGTCAT6870435CGTCATCGTCTCAGGACCAATCCAGAACTCAAATCCAACTCCGCAGCAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGGTCCTGAGACGATGACG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGTCCTGAGACGATGACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.072 | 2.063 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTCCTGAGACGATGACG&k=0&no_gap=0&offset=0&limit=50
2.243 | 0.171 | search_minus_done; http://172.18.8.135:50400/match?q=CGTCATCGTCTCAGGACCAA&k=0&no_gap=0&offset=0&limit=16
2.248 | 0.005 | cgi_end;

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