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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-03-24 22:28:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 8193 from Patent WO2008034648.
FB788920.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 13700 from Patent WO2008034648.
FB794427.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 30229 from Patent WO2008034648.
FB810956.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 66452 from Patent WO2008034648.
FB847179.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 109813 from Patent WO2008034648.
FB890540.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 8193 from Patent EP2090662.
HB658979.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 13700 from Patent EP2090662.
HB664486.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 30229 from Patent EP2090662.
HB681015.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 66452 from Patent EP2090662.
HB717238.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 109813 from Patent EP2090662.
HB760599.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 161457 from Patent EP2090662.
HB812243.1:535-554
AACCCCATGTCTGTTAATGAAAGTGGAAAG535TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAA
Sequence 3726 from patent US 9777287.
MI100756.1:789-808
AACCCCATGTCTGTTAATGAAAGTGGAAAG789TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
Sequence 5561 from patent US 10006042.
MI850288.1:808-827
AATCCAATGTCTGTGGATTCAAGTGGGAAA808TTGGTGAGCAATGTTGTGGTCGGCGTCACAACAGATAAGAAATAACAGCA
Sequence 5561 from patent US 10337023.
MO173455.1:808-827
AATCCAATGTCTGTGGATTCAAGTGGGAAA808TTGGTGAGCAATGTTGTGGTCGGCGTCACAACAGATAAGAAATAACAGCA
Sequence 3726 from patent US 10428344.
MO394651.1:789-808
AACCCCATGTCTGTTAATGAAAGTGGAAAG789TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
Sequence 5561 from patent US 10774340.
MV707202.1:808-827
AATCCAATGTCTGTGGATTCAAGTGGGAAA808TTGGTGAGCAATGTTGTGGTCGGCGTCACAACAGATAAGAAATAACAGCA
Sequence 3726 from patent US 10815494.
MV829993.1:789-808
AACCCCATGTCTGTTAATGAAAGTGGAAAG789TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
Sequence 3726 from patent US 11396659.
OO399754.1:789-808
AACCCCATGTCTGTTAATGAAAGTGGAAAG789TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
Sequence 5561 from patent US 11499161.
OO874983.1:808-827
AATCCAATGTCTGTGGATTCAAGTGGGAAA808TTGGTGAGCAATGTTGTGGTCGGCGTCACAACAGATAAGAAATAACAGCA
Sequence 3726 from patent US 11624075.
OS890763.1:789-808
AACCCCATGTCTGTTAATGAAAGTGGAAAG789TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
36RDBRG_UP_029_D01_23JUN2004_009 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence.
EE518507.1:225-244
AACCCCGTGTCTGTTAATGAAAGTGGAAAG225TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
EC01_d_2649 EC01 Eragrostis curvula cDNA, mRNA sequence.
EH184890.1:653-672
AATCCAATGACAGTAGATGAAAAAGGAAAA653TTGGTGAGCAATGTTGTGGTTGGAGTTACAACTGGTGGGAAAAAGTAATG
EC04_d_2661 EC04 Eragrostis curvula cDNA, mRNA sequence.
EH194162.1:653-672
AATCCAATGACAGTAGATGAAAAAGGAAAA653TTGGTGAGCAATGTTGTGGTTGGAGTTACAACTGGTGGGAAAAAGTAATG
EC04_d_3195 EC04 Eragrostis curvula cDNA, mRNA sequence.
EH194741.1:657-676
AATCCAATGACAGTAGATGAAAAAGGAAAA657TTGGTGAGCAATGTTGTGGTTGGAGTTACAACTGGTGGGAAAAAGTAATG
_43Z_C05 Bermudagrass Normalized cDNA Library Cynodon dactylon cDNA 5', mRNA sequence.
ES303111.1:94-113
AATCCAATGACAGTAGATGAAAAGGGAAAA94TTGGTGAGCAATGTTGTGGTTGGGGTCACAACTGGTGGGAAAAAGTAACG
BNAEN3GH_UP_085_E09_15SEP2006_071 Brassica napus BNAEN3GH Brassica napus cDNA 5', mRNA sequence.
ES998784.1:141-160
AACCCCATGTCTGTTAATGAAAGTGGAAAG141TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
BNAEN3GH_UP_089_E02_15SEP2006_008 Brassica napus BNAEN3GH Brassica napus cDNA 5', mRNA sequence.
ES999082.1:514-533
AACCCCATGTCTGTTAATGAAAGTGGAAAG514TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
0147747 Brassica napus Etiolated seedlings (Uni-ZAP) Brassica napus cDNA, mRNA sequence.
EV169411.1:401-420
AACCCCATGTCTGTTAATGAAAGTGGAAAG401TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
BR024717 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-073D04 5', mRNA sequence.
EX040073.1:314-333
AACCCCATGTCTGTTAATGAAAGTGGAAAG314TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAA
BR026516 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-096F02 5', mRNA sequence.
EX041872.1:314-333
AACCCCATGTCTGTTAATGAAAGTGGAAAG314TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
BR083678 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-047D04 5', mRNA sequence.
EX097388.1:695-714
AACCCCATGTCTGTTAATGAAAGTGGAAAG695TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
BR100321 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-111E09 5', mRNA sequence.
EX114031.1:668-687
AACCCCATGTCTGTTAATGAAAGTGGAAAG668TTGGTGAGCAATGTTGTGGTTGGAGTGACA
BR121913 root cDNA library KHRT Brassica rapa subsp. pekinensis cDNA clone KHRT-92H01 5', mRNA sequence.
EX138083.1:691-710
AACCCCATGTCTGTTAATGAAAGTGGAAAG691TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
RR4EE16TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EY925463.1:652-671
AACCCCATGTCTGTTAACGAAAGTGGAAAG652TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGAAAAGAAATAACCCAC
RR4F009TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
FD557728.1:652-671
AACCCCATGTCTGTTAACGAAAGTGGAAAG652TTGGTGAGCAATGTTGTGGTTGGAGTGA
UCRVU04_CCNI5243_b1 Cowpea 524B Mixed Tissue and Conditions cDNA Library UCRVU04-1-2 Vigna unguiculata cDNA clone CCNI5243.b1, mRNA sequence.
FG819326.1:71-90
AATCCAATGTCTGTGGATTCAAGTGGGAAA71TTGGTGAGCAATGTTGTGGTCGGCGTCACAACAGATAAGAAATAACAGCA
TSA: Raphanus sativus var. sativus RNA, contig: WG3_1043.
FX668937.1:552-571
AACCCCATGTCTGTTAACGAAAGTGGAAAG552TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGAAAAGAAATAACCCAC
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_20376.
FX758576.1:758-777
AACCCCATGTCTGTTAACGAAAGTGGAAAG758TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGAAAAGAAATAACCCAC
TSA: Raphanus sativus RS02069 mRNA sequence.
JT786616.1:3706-3725
AACCCCATGTCTGTTAACGAAAGTGGAAAG3706TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGAAAAGAAATAACCCAC
TSA: Chorispora bungeana T_41971 mRNA sequence.
KA078801.1:731-750
AACCCCATGTCTGTTGATGAAAGTGGAAAG731TTGGTGAGCAATGTTGTGGTTGGAGTGACAACTGATAAAAAATAACCGAG
Brassica oleracea zinc finger protein LSD2 (LSD2) mRNA, complete cds.
AF453323.1:749-768
AACCCCATGTCTGTTAATGAAAGTGGAAAG749TTGGTGAGCAATGTTGTGGTTGGAGTGACAACAGACAAGAAGAAATAACC
Fagus sylvatica genome assembly, chromosome: 11.
OU015771.1:27622487-27622506
TTAATTTCTCTGCTCTCGATTTCTATGGCT27622487TTGGTGAGCAATGTTGTGGTTGCAGTTAATTCAAATGACCAAATCCTTAT
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a008N13_SP6.
AM386212.1:304-323
GGTTATTTCTTCTTGTCTGTTGTCACTCCA304ACCACAACATTGCTCACCAACTTTCCACTTTCATTAACAGACATGGGGTT
0122742 Brassica napus Root library Brassica napus cDNA, mRNA sequence.
EV117430.1:318-337
GGTTATTTCTTCTTGTCTGTTGTCACTCCA318ACCACAACATTGCTCACCAACTTTCCACTTTCATTAACAGACATGGGGTT
0147790 Brassica napus Etiolated seedlings (Uni-ZAP) Brassica napus cDNA, mRNA sequence.
EV169416.1:358-377
GGTTATTTCTTCTTGTCTGTTGTCACTCCA358ACCACAACATTGCTCACCAACTTTCCACTTTCATTAACAGACATGGGGTT
0132601 Brassica napus Root - drought Brassica napus cDNA, mRNA sequence.
EV217493.1:287-306
GGTTATTTCTTCTTGTCTGTTGTCACTCCA287ACCACAACATTGCTCACCAACTTTCCACTTTCATTAACAGACATGGGGTT
RR4EE16JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
EY920931.1:320-339
GTGGGTTATTTCTTTTCTGTTGTCACTCCA320ACCACAACATTGCTCACCAACTTTCCACTTTCGTTAACAGACATGGGGTT
RR1F754JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
FD530388.1:312-331
GTGGGTTATTTCTTTTCTGTTGTCACTCCA312ACCACAACATTGCTCACCAACTTTCCACTTTCGTTAACAGACATGGGGTT
RR4F009JQ RR4(PB) Raphanus raphanistrum subsp. landra cDNA 3', mRNA sequence.
FD553767.1:320-339
GTGGGTTATTTCTTTTCTGTTGTCACTCCA320ACCACAACATTGCTCACCAACTTTCCACTTTCGTTAACAGACATGGGGTT
RS3FG64JQ RS3(RT) Raphanus sativus cDNA 3', mRNA sequence.
FD583674.1:319-338
GTGGGTTATTTCTTTTCTGTTGTCACTCCA319ACCACAACATTGCTCACCAACTTTCCACTTTCGTTAACAGACATGGGGTT
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_6800.
FX710063.1:347-366
GGTTATTTCTTCTTGTCTGTTGTCACTCCA347ACCACAACATTGCTCACCAACTTTCCACTTTCATTAACAGACATGGGGTT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_30726.
FX751755.1:315-334
GGTTATTTCTTCTTGTCTGTTGTCACTCCA315ACCACAACATTGCTCACCAACTTTCCACTTTCATTAACAGACATGGGGTT
TSA: Raphanus sativus RS02068 mRNA sequence.
JT786615.1:171-190
GTGGGTTATTTCTTTTCTGTTGTCACTCCA171ACCACAACATTGCTCACCAACTTTCCACTTTCGTTAACAGACATGGGGTT
TSA: Chorispora bungeana CK_37035 mRNA sequence.
KA025102.1:260-279
CTCGGTTATTTTTTATCAGTTGTCACTCCA260ACCACAACATTGCTCACCAACTTTCCACTTTCATCAACAGACATGGGGTT
TSA: Chorispora bungeana CK_37036 mRNA sequence.
KA025103.1:260-279
CTCGGTTATTTTTTATCAGTTGTCACTCCA260ACCACAACATTGCTCACCAACTTTCCACTTTCATCAACAGACATGGGGTT
Botrytis fabae purine nucleoside permease isoform 2 mRNA, complete cds.
MK723887.1:1394-1413
GGTACACTCCTCGGAGAAGCTTTCGAAAAC1394ACCACAACATTGCTCACCAACGGCTCGGGAGTTTACTGCATGACCGCCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGGTGAGCAATGTTGTGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGTGAGCAATGTTGTGGT | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.954 | 1.945 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTGAGCAATGTTGTGGT&k=0&no_gap=0&offset=0&limit=50
2.724 | 0.770 | search_minus_done; http://172.18.8.135:50400/match?q=ACCACAACATTGCTCACCAA&k=0&no_gap=0&offset=0&limit=8
2.733 | 0.009 | cgi_end;

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