GGGenome | Results

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2025-04-09 12:57:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:5623751-5623771

AAGGATTAAATCCTGGATCTGCCTCTGTTT5623751TTGGTGCTGTAAGGGACTAAATACATGTCCTGATAATGATTTGATCTCCTC

Capsicum chinense COSII marker COS322 genomic sequence.
GU906116.1:433-453

AAGGATTAAATCCTGGATCTGCCTCTGTTT433TTGGTGCTGTAAGGGACTAAATACGTGTCCTGATAATGATTTGATCTCCTC

Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:260929110-260929130

GAGGAGATCAAATCATTATCAGGACATGTA260929110TTTAGTCCCTTACAGCACCAAAAACAGAGGCAGATCCAGGATTTAATCCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTGCTGTAAGGGACTAAA&k=0&no_gap=0&offset=0&limit=50
0.144 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=TTTAGTCCCTTACAGCACCAA&k=0&no_gap=0&offset=0&limit=48
0.145 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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