GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 23:10:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Orcinus orca genome assembly, chromosome: 18.
OW443378.1:46038100-46038120
TAGGTTACAGCCCAGCATCACATCTTATGT46038100TTGGTTTGCCATGTTTCTTTCATCTCCTGATCAGTAGTACTTCCTCATCTC
Hyperoodon ampullatus genome assembly, chromosome: 16.
OX457071.1:45268870-45268890
TAGGTTACAGCCCAGCATCACATCTTATGT45268870TTGGTTTGCCATGTTTCTTTCATCTCCTGATCAGTGGTACTTCCTCATCTC
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:10105271-10105291
TACTTCTTCTTCTTCTTCTTCTTCTCTGTT10105271TTGGTTTGCCATGTTTCTTTCTTTCTCTCTCTGATTCTAAGTAAAAGTCAC
Lagenorhynchus albirostris genome assembly, chromosome: 18.
OX459090.1:32642331-32642351
GAGATGAGGAAGTACTACTGATCAGGAGAT32642331GAAAGAAACATGGCAAACCAAACATAAGATGTGATGCTGGGCTGTAACCTA
Delphinus delphis genome assembly, chromosome: 18.
OX465344.1:32550157-32550177
GAGATGAGGAAGTACTACTGATCAGGAGAT32550157GAAAGAAACATGGCAAACCAAACATAAGATGTGATGCTGGGCTGTAACCTA
Stenella coeruleoalba genome assembly, chromosome: 18.
OX596403.1:32442981-32443001
GAGATGAGGAAGTACTACTGATCAGGAGAT32442981GAAAGAAACATGGCAAACCAAACATAAGATGTGATGCTGGGCTGTAACCTA
Globicephala melas genome assembly, chromosome: 18.
OY734057.1:32416450-32416470
GAGATGAGGAAGTACTACTGATCAGGAGAT32416450GAAAGAAACATGGCAAACCAAACATAAGATGTGATGCTGGGCTGTAACCTA
Phocoena phocoena genome assembly, chromosome: 18.
OZ004775.1:32914939-32914959
GAGATAAGGAAGTACCACTGATCAGGAGAT32914939GAAAGAAACATGGCAAACCAAACATAAGATGTGATGCTGGGCTGTAACCTA
Trifolium repens mRNA, clone: WCC04p04_064, unspecified EST.
FY455692.1:46-66
GTGACTTTTACTTAGAATCAGAGAGAGAAA46GAAAGAAACATGGCAAACCAAAACAGAGAAGAAGAAGAAGAAGAAGAAGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGGTTTGCCATGTTTCTTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGGTTTGCCATGTTTCTTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=TTGGTTTGCCATGTTTCTTTC&k=0&no_gap=0&offset=0&limit=50
0.195 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAGAAACATGGCAAACCAA&k=0&no_gap=0&offset=0&limit=47
0.199 | 0.004 | cgi_end;

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