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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 18:36:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:43838392-43838411
ATGAGGACGTCGGGCCCCTAAGGGGGTGGA43838392TTGTAACATCCCACATAGCCCAAGGGAGTGATCCTTAAATGTATATTCTC
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:22651114-22651133
CGAGGACATCAGGCCCCTAAGGGGGGTGGA22651114TTGTAACATCCCACATAGCCTAGAGGAGTGATCCTTAAATGTATATTCTC
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141925.1:8363054-8363073
GAGGACGTCGGGTCCCTAAGAGGGGGTGGA8363054TTGTAACATCCCACATAGCCTAGGGGAGTGGATCCTCTAAGCCTTATATG
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:19976366-19976385
CGAGGACGTCGGGCCCCTAAAGGGGTTGGA19976366TTGTAACATCCCACATAGCCTAGGGGAGTGGATCATGTAAGCCTTATATG
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:6804069-6804088
CAGTTATTTTAGTGGGTGCTTGAACGATTC6804069TTGTAACATCCCACATAGCCCAGGGAAGTGGATCATTTAAGCCTTATATG
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:15312060-15312079
CGAGGACGTTGGGCCCCTAAGGGGGGTGGA15312060TTGTAACATCCCACATAGCCTAGTGGAGCGGATTCTGTAAGCCTTATATG
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:23929702-23929721
CGAGGACATCAGGCCCCTAAGGGGGGTGGA23929702TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTAAATGTATATTCCC
Malus hybrid cultivar cultivar Flame chromosome 16.
CP141942.1:8820166-8820185
GAGGACGTCGGGTCCCTAAGAGGGGGTGGA8820166TTGTAACATCCCACATAGCCCAGGGGAGTGGATCATCTAAGCCTTATATG
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141955.1:31179189-31179208
CGAGGACGTCGGACCCGTAAGGGGGGTGGA31179189TTGTAACATCCCACATAGCCCAGGGGAGTGGATCCTGTAAGCCTTTTGGG
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:19360794-19360813
CGAGGACGTCGGGCCCCTAAAGGGGTTGGA19360794TTGTAACATCCCACATAGCCTAGGGGAGTGGATCATGTAAGCCTTATATG
Malus hybrid cultivar cultivar Royalty chromosome 6.
CP141958.1:8446072-8446091
CGAGGACATCGGGCCCCTAAGGGGGGTGGA8446072TTGTAACATCCCACATAGCCCAAGGGAGTGATCCTTAAATGTATATTCAC
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:8506520-8506539
GATGACGTCGAGTCCCTAAGAGGGGGTGGA8506520TTGTAACATCCCACATAGCCTAGGGGAGTGGATCCTCTAAGCCTTATATG
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141968.1:14577965-14577984
CAAGGACGTCAGGCCCCTAAGGGAGGTGGA14577965TTGTAACATCCCACATAGCCCAGAGATGAAGATCTTATAAGCCTTATATG
Malus hybrid cultivar cultivar Royalty chromosome 16.
CP141985.1:9232596-9232615
GAGGACGTCGGGTCCCTAAGAGGGGGTGGA9232596TTGTAACATCCCACATAGCCCAGGGGAGTGGATCATCTAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:19648266-19648285
CGAGGACGTCGGGCCCCTAAAGGGGTTGGA19648266TTGTAACATCCCACATAGCCTAGGGGAGTGGATCATGTAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:27019696-27019715
TATACCCCAAACTATTTTCATTGTGTATAT27019696TTGTAACATCCCACATAGCCAAGGAGAGTGATCCTTAAATGTATATTTTC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:16914616-16914635
CGAGGACGTCGAACCCTTAAGGGGGGTGGA16914616TTGTAACATCCCACATAGCCCATGGGAGTGGATCTTGTAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 9.
CP143366.1:32408152-32408171
CGAGGACGTCGGACCCCTAAGGGGGGTGGA32408152TTGTAACATCCCACATAGCCCAGGAGAGTGGATCATATATATGTTCCTAT
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:15707773-15707792
CGAGGACGTTGGGCCCCTAAGGGGGGTGGA15707773TTGTAACATCCCACATAGCCTAGTGGAGCGGATTCTGTAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:24217871-24217890
CGAGGACATCAGGCCCCTAAGGGGGGTGGA24217871TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTAAATGTATATTCCC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:21461276-21461295
CGCTATCTCATCCACTTGGTTTACAGATGA21461276TTGTAACATCCCACATAGCCTAGGGGAATAGATCTTGTAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:8917945-8917964
GATGACGTCGGGTCCCTAAGAGGGGGTGGA8917945TTGTAACATCCCACATAGCCCAGGGGAGTGGATCCTCTAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 16.
CP143373.1:14473725-14473744
CAAGGACGTCAGGCCCCTAAGGGAGGTGGA14473725TTGTAACATCCCACATAGCCCAGAGGTGAAGATCCTATAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:13680083-13680102
ACATAGTAACCCCTCACTGTAAAACCCTTA13680083TTGTAACATCCCACATAGCCCAGGGGAGTGGATCCTGTAAGCCTTATATG
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:24768408-24768427
TATACCCCAAACTATTTTCATTGTGTATAT24768408TTGTAACATCCCACATAGCCAAGGAGAGTGATCCTTAAATGTATATTTTC
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:17279766-17279785
TGAGGACGTCGAACCCTTAAGGGGGGTGGA17279766TTGTAACATCCCACATAGCCCATGGGAGTGGATCTTGTAAGCCTTATATG
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:15297562-15297581
CGAGGACATTGGGCCCCTAAGGGGGGTGGA15297562TTGTAACATCCCACATAGCCCAGTGGAGCGGTTTCTGTAAACCTTATATG
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:8437615-8437634
GATGACGTCGAGTCCCTAAGAGGGGGTGGA8437615TTGTAACATCCCACATAGCCTAGGGGAGTGGATCCTCTAAGCCTTATATG
Malus sylvestris genome assembly, chromosome: 16.
OU696518.1:14489963-14489982
CAATGACGTCAGGCCCCTAAGGGAGGTGGA14489963TTGTAACATCCCACATAGCCTAGGGGTGAAGATCCTATAAGCCTTATATG
Malus domestica genome assembly, chromosome: 2.
OU696678.1:9068946-9068965
ACCCATACCTGATTGACTCCCTCCCAACCA9068946TTGTAACATCCCACATAGCCCAGGGAGTGGATCATGTAAACCTTATATGT
Malus domestica genome assembly, chromosome: 5.
OU696681.1:25615581-25615600
TATACCCCAAACTATTTTCATTGTGTATAT25615581TTGTAACATCCCACATAGCCAAGGAGAGTGATCCTTAAATGTATATTTTC
Malus domestica genome assembly, chromosome: 6.
OU696682.1:17066379-17066398
CGAGGACGTCGAACCCTTAAGGGGGGTGGA17066379TTGTAACATCCCACATAGCCCATGGGAGTGGATCTTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 13.
OU696689.1:15693955-15693974
CGAGGACGTTGGGCCCCTAAGGGGGGTGGA15693955TTGTAACATCCCACATAGCCTAGTAGAGCGGATTCTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 13.
OU696689.1:24226901-24226920
CGAGGACATCAGGCCCCTAAGGGGGGTGGA24226901TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTAAATGTATATTCCC
Malus domestica genome assembly, chromosome: 15.
OU696691.1:21355209-21355228
CGCTATCTCATCCACTTGGTTTACAGATGA21355209TTGTAACATCCCACATAGCCTAGGGGAATAGATCTTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 16.
OU696692.1:8944717-8944736
GAGGACGTCGGGTCCCTAAGAGGGGGTGGA8944717TTGTAACATCCCACATAGCCCAGGGGAGTGGATCATCTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 4.
OU744545.1:19819077-19819096
CGAGGACGTCGGGCCCCTAAAGGGGTTGGA19819077TTGTAACATCCCACATAGCCTAGGGGAGTGGATCATGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 6.
OU744547.1:17031443-17031462
CGAGGACGTCGAACCCTTAAGGGGGGTGGA17031443TTGTAACATCCCACATAGCCCATGGGAGTGGATCTTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 9.
OU744550.1:33066022-33066041
CGAGGACGTCGGACCCCTAAGGGGGGTGGA33066022TTGTAACATCCCACATAGCCCAGGAGAGTGGATCATATATATGTTCCTAT
Malus domestica genome assembly, chromosome: 13.
OU744554.1:23269921-23269940
CGAGGACATCAGGCCCCTAAGGGGGGTGGA23269921TTGTAACATCCCACATAGCCTAGAGGAGTGATCCTTAAATGTATATTCTC
Malus domestica genome assembly, chromosome: 15.
OU744556.1:21297611-21297630
CGCTATCTCATCCACTTGGTTTACAGATGA21297611TTGTAACATCCCACATAGCCTAGGGGAATAGATCTTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 16.
OU744557.1:9034323-9034342
GAGGACGTCGGGTCCCTAAGAGGGGGTGGA9034323TTGTAACATCCCACATAGCCCAGGGGAGTGGATCATCTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 16.
OU744557.1:14609295-14609314
CAATGACGTCAGGCCCCTAAGGGAGGTGGA14609295TTGTAACATCCCACATAGCCTAGGGGTGAAGATCCTATAAGCCTTATATG
Malus domestica genome assembly, chromosome: 4.
OU744956.1:20046548-20046567
CGAGGACGTCGGGCCCCTAAAGGGGTTGGA20046548TTGTAACATCCCACATAGCCTAGGGGAGTGGATCATGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 9.
OU744961.1:32756908-32756927
CGAGGACGTCGGACCCCTAAGGGGGGTGGA32756908TTGTAACATCCCACATAGCCCAGGAGAGTGGATCATATATATGTTCCTAT
Malus domestica genome assembly, chromosome: 13.
OU744965.1:15521773-15521792
CGAGGACGTTGGGCCCCTAAGGGGGGTGGA15521773TTGTAACATCCCACATAGCCTAGTGGAGCGGATTCTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 13.
OU744965.1:24168556-24168575
CGAGGACATCAGGCCCCTAAGGGGGGTGGA24168556TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTAAATGTATATTCCC
Malus domestica genome assembly, chromosome: 15.
OU744967.1:21277879-21277898
CGCTATCTCATCCACTTGGTTTACAGATGA21277879TTGTAACATCCCACATAGCCTAGGGGAATAGATCTTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 16.
OU744968.1:8916423-8916442
GAGGACGTCGGGTCCCTAAGAGGGGGTGGA8916423TTGTAACATCCCACATAGCCCAGGGGAGTGGATCATCTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 16.
OU744968.1:14888763-14888782
CAAGGACGTCAGGCCCCTAAGGGAGGTGGA14888763TTGTAACATCCCACATAGCCCAGAGGTGAAGATCCTATAAGCCTTATATG
Malus domestica genome assembly, chromosome: 2.
OU744992.1:9068879-9068898
ACCCATACCTGATTGACTCCCTCCCAACCA9068879TTGTAACATCCCACATAGCCCAGGGAGTGGATCATGTAAACCTTATATGT
Malus domestica genome assembly, chromosome: 4.
OU744994.1:19975296-19975315
CGAGGACGTCGGGCCCCTAAAGGGGTTGGA19975296TTGTAACATCCCACATAGCCTAGGGGAGTGGATCATGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 5.
OU744995.1:27483643-27483662
TATACCCCAAACTATTTTCATTGTGTATAT27483643TTGTAACATCCCACATAGCCAAGGAGAGTGATCCTTAAATGTATATTTTC
Malus domestica genome assembly, chromosome: 6.
OU744996.1:13107655-13107674
ACGAGGACGTCGAACCCTTAAGGGGGTGGA13107655TTGTAACATCCCACATAGCCCATGGGAGTGGATCTTGTAAGCGTTATATG
Malus domestica genome assembly, chromosome: 9.
OU744999.1:32758316-32758335
CGAGGACGTCGGACCCCTAAGGGGGGTGGA32758316TTGTAACATCCCACATAGCCCAGGAGAGTGGATCATATATATGTTCCTAT
Malus domestica genome assembly, chromosome: 13.
OU745003.1:15395304-15395323
CGAGGACATTGGGCCCCTAAGGGGGGTGGA15395304TTGTAACATCCCACATAGCCTAGTGGAGCGGTTTCTGTAAACCTTATATG
Malus domestica genome assembly, chromosome: 13.
OU745003.1:23807389-23807408
CGAGGACATCAGGCCCCTAAGGGGGGTGGA23807389TTGTAACATCCCACATAGCCCAGGCGAGTGATCCTTAAATGTATATTCCC
Malus domestica genome assembly, chromosome: 15.
OU745005.1:21204033-21204052
CGCTATCTCATCCACTTGGTTTATAGATGA21204033TTGTAACATCCCACATAGCCTAGGGGAATAGATCTTGTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 16.
OU745006.1:8968117-8968136
GATGACGTCGGGTCCCTAAGAGGGGGTGGA8968117TTGTAACATCCCACATAGCCCAGGGGAGTGGATCCTCTAAGCCTTATATG
Malus domestica genome assembly, chromosome: 16.
OU745006.1:14930949-14930968
CAAGGACGTCAGGCCCCTAAGGGAGGTGGA14930949TTGTAACATCCCACATAGCCCAGAGGTGAAGATCCTATAAGCCTTATATG
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:12901877-12901896
CGAAGACGTCGGGCCCCTAAGGGGGATAGA12901877TTGTAACATCCCACATAGCCCAAGGAAGTGGATCATGTAAGCCTTATATG
Malus x robusta genome assembly, chromosome: 3.
OY720327.1:9283559-9283578
GAGGACGTCGGGTCCCTAAGAGGGGGTGGA9283559TTGTAACATCCCACATAGCCCAGGGGAGTGGATCATCTAAGCCTTATATG
Malus x robusta genome assembly, chromosome: 8.
OY720332.1:32410626-32410645
CGAGGACGTCGGACCCCTAAGGGGGGTGGA32410626TTGTAACATCCCACATAGCCCAGGAGAGTGGATCATATATATGTTCCTAT
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:15109538-15109557
CGAGGACGTTGGGCCCCTAAGGGGGGTGGA15109538TTGTAACATCCCACATAGCCTAGTGGAGCGGATTCTGTAAGCCTTATATG
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:23800326-23800345
CGAGGACATCAGGCCCCTAAGGGGGGTGGA23800326TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTAAATGTATATTCCC
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:15803911-15803930
CGAGGACGTCGGGCCCCTAAGGGGAGTGGA15803911TTGTAACATCCCACATAGCCCAAGGGAGTGATCTTTAAATGTATATTCAC
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:13412736-13412755
CGAGGACGTCGAGCCCTTAAGAGGAGTGGA13412736TTGTAACATCCCACATAGCCCATGGGAATGGATCTTGTAAGCCTTATATG
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:17151407-17151426
ACGAGGACGTCGGGCCCCTAAGATGGTGGA17151407TTGTAACATCCCACATAGCCAGCACGTCCTGATTCGGGTCCGGGTGTGTC
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:15955526-15955545
AGGACGTCGGGCCCCTAAGGGGGGGGTGGA15955526TTGTAACATCCCACATAGCCTAGGGGAGTGATCCTTATATGTATATTCCT
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:29877273-29877292
ACGAGGACATCGGGCCCCTAGGGGGGTGGA29877273TTGTAACATCCCACATAGCCCAAGGGAGATGATCCTGTAAGCCTTAAATG
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:10092086-10092105
TGGGGGCTCGTGTCGGGATGTGAAAATTTA10092086TTGTAACATCCCACATAGCCCAGGGGAGAGGATCCTGTAAGCCTTATATG
Crataegus laevigata genome assembly, chromosome: 16.
OY756953.1:9720903-9720922
CGAAGACGTTGGGCCTTTAAGGGGAGTGGA9720903TTGTAACATCCCACATAGCCTAGGGGATAGGATCATGTAAGCCTTATATG
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:3048884-3048903
CCAACAAAAATGATCCTAAACCCTAACTGG3048884TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTATATGTATATTCCC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:6178483-6178502
CGATGACGACGTCGGGCCCCTAAGGGTGGA6178483TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTATATGTATATTCTC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:13106200-13106219
CGAGGACGTCAGGCCCTTAAGGGGGGTGGA13106200TTGTAACATCCCACATAGCCCAAGGGAAGTGGATCATGTAAGCTTTATAT
Pyrus communis genome assembly, chromosome: 4.
OY757071.1:23722212-23722231
CGAGGACGTCGGGCCCCTAAGGGGGGTGAA23722212TTGTAACATCCCACATAGCCCAGGGGAGTGATCCTTATATGTATATTCCC
Pyrus communis genome assembly, chromosome: 5.
OY757072.1:10367587-10367606
CGAAGACGTCGGGCCCCTAAGGGGGGTGGA10367587TTGTAACATCCCACATAGCCCAGGGGAGTAGATCCTGTAAGCCTTATATG
Pyrus communis genome assembly, chromosome: 9.
OY757076.1:23775426-23775445
CGAACTCAGGGGGAGTATCCTGAAGTATAC23775426TTGTAACATCCCACATAGCCCAGGGGTATGGATCATGTAAGCCTTATATG
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:18123639-18123658
CGAGGACGTCGAGCCCCTAAGGGGGGTGGA18123639TTGTAACATCCCACATAGCCCAAGGGAATGGATCATGTAAGCCTTATATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTAACATCCCACATAGCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTAACATCCCACATAGCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.375 | 0.366 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTAACATCCCACATAGCC&k=0&no_gap=0&offset=0&limit=50
0.525 | 0.150 | search_minus_done; http://172.18.8.135:50400/match?q=GGCTATGTGGGATGTTACAA&k=0&no_gap=0&offset=0&limit=0
0.525 | 0.000 | cgi_end;

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