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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-15 17:26:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Betula platyphylla Unigene36452_All.Beplwood mRNA sequence.
KA276373.1:1573-1592
AGAGTAACAGCCAAATTCTGAAGCCTTTGA1573TTGTACACACCCTCAGCCTGAACCTCAGCATCACTCCTCTCAACTTCAAG
UDP96-008 AC- and AG-enriched peach leaf genomic libraries Prunus persica STS genomic clone peach-ac 46, sequence tagged site.
BV079692.1:18-37
AATTCTGAAGCCTTTGG18TTGTACACACCCTCAGCCTGTCATGCAAAAGNATAATAAGCAAGGGAGCA
Prunus avium clone UDP96-008 microsatellite sequence.
AF501740.1:1-20
1TTGTACACACCCTCAGCCTGTCACGCAAAAAGAAATAATAAGCAAGGGAG
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:18105519-18105538
AGAGTAACAGCCAAATTCTGAAGCCTTTGG18105519TTGTACACACCCTCAGCCTGTCATGCAAAAAGAAATAATAAGCAAGGGAG
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:27852687-27852706
AGAGTGACAGCAAGATTTTGAAGCCTTTGG27852687TTGTACACACCCTCAGCCTGAGTCGTACAAAAGATAGGATGAAGAGAAAT
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-10.
CP023122.1:299022-299041
AGAGTGAGAGCAAGGTTCTGAAGCCTTTGG299022TTGTACACACCCTCAGCCTGAGTAACAAAAGACAAGATTAAGGGAAATAA
Corylus americana cultivar Rush chromosome 5.
CP125818.1:4496380-4496399
AGAGTAACAGCCAAATTCTGAAGCCTTTGA4496380TTGTACACACCCTCAGCCTGTGTCACCAGAAAAAAGATATTATCCACAAG
Corylus americana cultivar Winkler chromosome 5.
CP125829.1:4686071-4686090
AGAGTAACAGCCAAATTCTGAAGCCTTTGA4686071TTGTACACACCCTCAGCCTGTGTCACCAGAAAAAAGATATTATCCACAAG
Saururus chinensis isolate CL-2023b chromosome 6.
CP141145.1:44624215-44624234
AGGGTAATAGCCAAATTTTGAAGCCTCTGG44624215TTGTACACACCCTCAGCCTGTACATCATTCGAACAAAAAATAAGAGAGAC
Corylus avellana genome assembly, chromosome: ca5.
LR899427.1:6297674-6297693
AGAGTAACAGCCAAATTCTGAAGCCTTTGA6297674TTGTACACACCCTCAGCCTGTGTCACCAGAAAAAAGATATTATCCACAAG
Geum urbanum genome assembly, chromosome: 12.
OX327008.1:46614322-46614341
AGAGTAACAGCTAGATTCTGAAGCCTTTGA46614322TTGTACACACCCTCAGCCTGTATCGTGGAATAAGATAAATGAGCCGTTAG
Geum urbanum genome assembly, chromosome: 13.
OX327009.1:47249077-47249096
AGAGTAACAGCTAGATTCTGGAGCCTTTGA47249077TTGTACACACCCTCAGCCTGTATCGTGGAATAAGATATATGACCCGTTAG
Geum urbanum genome assembly, chromosome: 14.
OX327010.1:45357767-45357786
AGAGTAACAGCTAGATTCTGAAGCCTTTGA45357767TTGTACACACCCTCAGCCTGTATCATGGAATAAGATACCCGTTAGCACCA
Alnus glutinosa genome assembly, chromosome: 2.
OY340899.1:4895499-4895518
AGAGTAACAGCCAAATTCTGAAGCCTTTGA4895499TTGTACACACCCTCAGCCTGTCTCACCAGAAAAAGATATCATCCACAAGG
Humulus lupulus genome assembly, chromosome: 2.
OY720648.1:32060594-32060613
AGAGTAACTGCCAAATTTTGAAGCCTTTGG32060594TTGTACACACCCTCAGCCTGTCAAGGACATGGGTTGAGAATTTAATATCA
Astragalus glycyphyllos genome assembly, chromosome: 5.
OY754311.1:27247308-27247327
AGAGTGACAGCAAGATTCTGAAGCCTCTGG27247308TTGTACACACCCTCAGCCTGAGTCACACAAAGATATTAAAGGGAAATAAC
Lotus japonicus mRNA, clone: GNr008b04, 5' end sequence.
DC594741.1:269-288
CTTGACGTTGAAAAGAGTGATGCTGAAGTT269CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATCTTGCTGTCACTCT
PU4_plate32_J16 PU4 Prunus persica cDNA similar to weakly similar to SET domain-containing protein [Arabidopsis thaliana], mRNA sequence.
DY653403.1:132-151
CTTGAGGTTGAGAAGAGTGATGCTGAGGTT132CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAGAATTTGGCTGTTACTCT
HLUTR3CH_T3_015_E03_27MAR2006_023 HLUTR3CH Humulus lupulus cDNA, mRNA sequence.
GD249931.1:547-566
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT547CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
Prunus avium EST, clone WZ0APVCA4YJ01FM1.
HE640584.1:360-379
CTTGAGGTTGAGAAGAGTGATGCTGAGGTT360CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAGAATTTGGCTGTTACTCT
TSA: Physalis peruviana Php00a04474.14427 mRNA sequence.
JO138499.1:3355-3374
CTGGAAGTTGAGAAAAACGAATCTGAGATT3355CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAGAACTTGGCTCTGACTCT
TSA: Cannabis sativa PK11213.1_1.CasaPuKu mRNA sequence.
JP454165.1:6608-6627
CTGGAGGTCGAGAAAAGTGATGCGGAAGTT6608CAGGCTGAGGGTGTGTACAATCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Betula platyphylla Unigene2371_ya_RNA mRNA sequence.
JP670701.1:1583-1602
CTTGAAGTTGAGAGGAGTGATGCTGAGGTT1583CAGGCTGAGGGTGTGTACAATCAAAGGCTTCAGAATTTGGCTGTTACTCT
TSA: Nothofagus nervosa GR7D2IN02G9O1U mRNA sequence.
JT774715.1:61-80
CTTGAAGTTGAGACGAGTGATGCTGAGGTT61CAGGCTGAGGGTGTGTACAATCAAAGGCTTCAGAATTTGGCTGTCACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq1.
LA641421.1:7547-7566
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7547CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq4.
LA641424.1:7678-7697
TGATATTAAATTCTCAACCCATGTCCTTGA7678CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq7.
LA641427.1:7578-7597
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7578CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq14.
LA641433.1:7578-7597
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7578CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq16.
LA641435.1:7647-7666
TGATATTAAATTCTCAACCCATGTCCTTGA7647CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq18.
LA641437.1:7742-7761
TGATATTAAATTCTCAACCCATGTCCTTGA7742CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq19.
LA641438.1:7553-7572
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7553CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq23.
LA641442.1:7767-7786
TGATATTAAATTCTCAACCCATGTCCTTGA7767CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq24.
LA641443.1:7528-7547
TGATATTAAATTCTCAACCCATGTCCTTGA7528CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq27.
LA641446.1:7667-7686
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7667CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq31.
LA641449.1:7659-7678
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7659CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq33.
LA641451.1:7539-7558
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7539CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq34.
LA641452.1:7447-7466
TGATATTAAATTCTCAACCCATGTCCTTGA7447CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq38.
LA641456.1:7647-7666
TGATATTAAATTCTCAACCCATGTCCTTGA7647CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq42.
LA641460.1:7458-7477
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7458CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq44.
LA641462.1:7653-7672
TGATATTAAATTCTCAACCCATGTCCTTGA7653CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq46.
LA641464.1:7447-7466
TGATATTAAATTCTCAACCCATGTCCTTGA7447CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq48.
LA641466.1:7539-7558
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7539CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq49.
LA641467.1:7728-7747
TGATATTAAATTCTCAACCCATGTCCTTGA7728CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq54.
LA641472.1:7558-7577
TGATATTAAATTCTCAACCCATGTCCTTGA7558CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq57.
LA641475.1:7647-7666
TGATATTAAATTCTCAACCCATGTCCTTGA7647CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq61.
LA641478.1:7347-7366
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7347CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq67.
LA641482.1:7628-7647
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7628CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq69.
LA641484.1:7553-7572
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7553CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq71.
LA641486.1:7428-7447
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7428CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq73.
LA641488.1:7458-7477
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7458CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq78.
LA641492.1:7558-7577
TGATATTAAATTCTCAACCCATGTCCTTGA7558CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq79.
LA641493.1:7667-7686
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7667CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq81.
LA641495.1:7347-7366
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7347CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295283_c1_seq82.
LA641496.1:7458-7477
CTGGAGGTCGAGAAAAGTGATGCTGAAGTT7458CAGGCTGAGGGTGTGTACAACCAAAGGCTTCAAAATTTGGCAGTTACTCT
Carpinus viminea chromosome 7.
CP054673.1:34868678-34868697
CCTTGTGGATAATATCTTTTTTTCTGGTGA34868678CAGGCTGAGGGTGTGTACAATCAAAGGCTTCAGAATTTGGCTGTTACTCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTACACACCCTCAGCCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTACACACCCTCAGCCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.402 | 0.393 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTACACACCCTCAGCCTG&k=0&no_gap=0&offset=0&limit=50
1.406 | 1.004 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGCTGAGGGTGTGTACAA&k=0&no_gap=0&offset=0&limit=34
1.433 | 0.026 | cgi_end;

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