GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:34:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Geotrypetes seraphini genome assembly, chromosome: 19.
LR699164.1:13061060-13061079
GTCATTGCACACTAGCTCCAAAGTAAATAT13061060TTGTACACCCAATAAGTGGACAGTGAAGTATGTCCATGGATTAACTGGCC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:103608521-103608540
TCTTACATTACACAATGGGAAAGATATTTG103608521TTGTACACCCAATAAGTGGATTTAGAGAGAAATAGGAAAATATGAGAATA
Gonocerus acuteangulatus genome assembly, chromosome: 6.
OX328128.1:25012375-25012394
CATATTCCGTTGTCCCTGAATAAAACTTAT25012375TTGTACACCCAATAAGTGGAAGATGATTATTCGAAAGTCCAATAAAAGAT
Calliopum simillimum genome assembly, chromosome: 5.
OX638372.1:110972068-110972087
GACATCCACCGTCAAATTCCGGTTTTTAAG110972068TTGTACACCCAATAAGTGGAAGTCTCTTGTGTTTAACGTGAGCACTTGCC
Lotus japonicus genomic DNA, chromosome 1, clone: LjB15M22, BM1745a.
AP010458.1:41306-41325
TATTCTCATATTTTCCTATTTCTCTCTAAA41306TCCACTTATTGGGTGTACAACAAATATCTTTCCCATTGTGTAATGTAAGA
Nephrotoma flavescens genome assembly, chromosome: 2.
OW052221.1:2877789-2877808
CAAATTTGAATCTAAAGATTTTTCCACCTA2877789TCCACTTATTGGGTGTACAAATGTATTTCCGACCTTTTTGGTTAGGTGTC
Calliopum simillimum genome assembly, chromosome: 3.
OX638370.1:38720133-38720152
TATGTGCAGTACGCGTGTGCATTGTCCGAC38720133TCCACTTATTGGGTGTACAACTTAAAAACCGGAATTTGACGGTGGATGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTGTACACCCAATAAGTGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTACACCCAATAAGTGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTACACCCAATAAGTGGA&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TCCACTTATTGGGTGTACAA&k=0&no_gap=0&offset=0&limit=46
0.118 | 0.002 | cgi_end;

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