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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:17:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus pipistrellus genome assembly, chromosome: 20.
LR862376.1:6755978-6755997
AGTAAAATAACAAGGTCAGGGTCAGCAGAT6755978TTGTCTTTGTTGCTGTTGCCGAGAGAGAAAGAACGACAAGTGAGTCGCTG
Valencia hispanica genome assembly, chromosome: 2.
OY747701.1:43259814-43259833
TTGAACTTAAAGACTGACCTATTTTTTGTT43259814TTGTCTTTGTTGCTGTTGCCAAAAAAGAAATAGCATTTTTTTTTTCGTAT
Nannobrachium achirus genome assembly, chromosome: 13.
OY997650.1:25346233-25346252
AAATTACTTATGTTGTATTGCTTGGACATT25346233TTGTCTTTGTTGCTGTTGCCGCACATTTTAAGGGAGATTATCATGGGGGG
Larus fuscus genome assembly, chromosome: 9.
OZ010762.1:4434421-4434440
CCTGGGTTGCAGCTCACACCTGTCCTCAAC4434421TTGTCTTTGTTGCTGTTGCCTCTTTTTTTCAATGCAAGGAGGGCTAAACA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 1H.
OX460040.1:211974518-211974537
TTGTAGTTGTTGTCGATGTTGTCGTCGTTG211974518TTGTCTTTGTTGCTGTTGCCGTAGTTGTTGTTGTTGTTGTTGTTGTTGTT
Protocalliphora azurea genome assembly, chromosome: 4.
OW026522.1:15212353-15212372
TAAATTACTAACTCCATAAGCCAACTGTTG15212353TTGTCTTTGTTGCTGTTGCCTACAATTTAATTCCGCTTCATATAAAGAAT
Thelaira solivaga genome assembly, chromosome: 4.
OX377613.1:8011941-8011960
TAGCTGCTGCTGTTGTTGTGGCTGTTACTG8011941TTGTCTTTGTTGCTGTTGCCGCTCCCATTATTATGTCTGTCATTGTGTTT
Suillia variegata genome assembly, chromosome: 1.
OX421842.1:51901520-51901539
ATGACAGCATATTTGCAATGGCATTCATTG51901520TTGTCTTTGTTGCTGTTGCCATTATTGTTGTTGTTGTTGTTGTCTTTTGT
Hydrotaea cyrtoneurina genome assembly, chromosome: 4.
OY282515.1:82715608-82715627
TTGTTGCTGTTGTTGTTGTTGGTGTTGTTA82715608TTGTCTTTGTTGCTGTTGCCATTCCCTTTATGGTCGATGGCTGTCGTTGC
Hydrotaea diabolus genome assembly, chromosome: 2.
OY740717.1:8474587-8474606
CGATGCAGTTGTTTGCTGCCTCACTAGTTG8474587TTGTCTTTGTTGCTGTTGCCGTTCTATATATATTTTTGTATATATAAATA
Sepioteuthis lessoniana genome assembly, chromosome: 21.
OY757924.1:12385966-12385985
CTGTTGTTGTTGTTGTTGCTGTTGTTTCTG12385966TTGTCTTTGTTGCTGTTGCCTCTGCTGGAGTTCTTGTTGTTGTTGTTGCC
Pipistrellus nathusii genome assembly, chromosome: 20.
OY882877.1:7212781-7212800
CAGCGACTCACTTGTCGTTCTTTCTCTCTC7212781GGCAACAGCAACAAAGACAAATCTGCTGACCCTGACCTTGTTATTTTACT
Pipistrellus nathusii genome assembly, chromosome: 20.
OY883197.1:6321752-6321771
CAGCGACTCACCTGTCGTTCTTTCTCTCTC6321752GGCAACAGCAACAAAGACAAATCTGCTGACCCTGACCTTGTTATTTTACT
Chroicocephalus ridibundus genome assembly, chromosome: 9.
OZ001742.1:46173368-46173387
TGTTTAGCCCTCCTTGCATTGAAAAAAAGA46173368GGCAACAGCAACAAAGACAAGTTGAGGACAGGTGTGAGCTGCAACCCAGG
Porphyra yezoensis cDNA, clone:PFL092e04_r, 5'end.
AU196638.1:253-272
TACAGCAGCAGCAGCAGCAGCATCAGCAGC253GGCAACAGCAACAAAGACAAGAACAATTGCAGCTACAGGAGGCGCAGCTG
1093012100130 Global-Ocean-Sampling_GS-28-01-01-1P6-2P0KB marine metagenome genomic clone 1061002308865 5', genomic survey sequence.
EJ406774.1:738-757
TGTATCTTTGTAATAAATAGAAATACTCAT738GGCAACAGCAACAAAGACAAAAATCTCCAATATTCTTACTCTTTACATGG
Myopa tessellatipennis genome assembly, chromosome: 2.
OX031315.1:53318887-53318906
TAAACAGAAACGGAAAGAAAAGAAGCGAAA53318887GGCAACAGCAACAAAGACAATAAAAATGGGGTTCATTATTTCATAAAATC
Eupeodes corollae genome assembly, chromosome: 1.
OX244023.1:136836716-136836735
AGGCGCGCCGCCAACAAGAGGCGGCTCAAA136836716GGCAACAGCAACAAAGACAATAGGAAGATAAAAACCAAAAAAAAACAACA
Anaspis maculata genome assembly, chromosome: 2.
OX421962.1:42055143-42055162
GATCGTAAATGATAAGTACCTATATACAAT42055143GGCAACAGCAACAAAGACAATGAACAGGGTGGCGACTGGCGGTAGCTTCT
Conops quadrifasciatus genome assembly, chromosome: 2.
OX457078.1:1426897-1426916
CGCAATAACAACAACAACAACGACAACGAT1426897GGCAACAGCAACAAAGACAACAACAATGACTGGCTCGGCTCGACTCCTTT
Machimus rusticus genome assembly, chromosome: 3.
OX608051.1:9329298-9329317
CAAAACAGGTCCAAGTCCATTGGAACGTCC9329298GGCAACAGCAACAAAGACAAGATTGTTCATAACTCCCTCATATTCAGACA
Ptychoptera albimana genome assembly, chromosome: 2.
OY540802.1:10904213-10904232
AAAAAAAACTTTTATCACAACAACAGCAAC10904213GGCAACAGCAACAAAGACAAAAAAAAAAAAAATATGTTTTTGTTTCGTTT
Cepaea hortensis genome assembly, chromosome: 17.
OY992892.1:88166870-88166889
AATAATAACAACAAAAACAACAACATCAAT88166870GGCAACAGCAACAAAGACAACAACAACAGCAATTAGTTTATTTGGTAAAT
Cepaea hortensis genome assembly, chromosome: 17.
OY992892.1:88260183-88260202
AATAATAACAACAAAAACAACAACATCAAT88260183GGCAACAGCAACAAAGACAACAACAACAACAATTAATTTATTTGGTAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTCTTTGTTGCTGTTgCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTCTTTGTTGCTGTTgCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.194 | 0.185 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTCTTTGTTGCTGTTGCC&k=0&no_gap=0&offset=0&limit=50
0.335 | 0.141 | search_minus_done; http://172.18.8.135:50400/match?q=GGCAACAGCAACAAAGACAA&k=0&no_gap=0&offset=0&limit=39
0.344 | 0.009 | cgi_end;

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