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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-24 10:47:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:2545138-2545157
GTTCCGCCGCCATATTCAGTTTGGCTCTTG2545138TTGTGAAACACCATCCATGCTTTGTTCTCGTAGAAGCAGGCGCCCTTCCA
Acrobasis suavella genome assembly, chromosome: 14.
OW971942.1:5961538-5961557
AATGAAATAAGTAGATTTTTTATTTTAAAA5961538TTGTGAAACACCATCCATGCTGCAAACGAAACGAAAGTTCTCAAACAGGA
Pv043B_M13F_E04.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
FE711573.1:306-325
TGGAAGGGCGCCTGCTTCTACAAGAACACA306GCATGGATGGTGTTTCACAACAAGAGCCTCACTGAATATGGCGGCGGAAC
UCRVU05_CCNN3868_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN3868.b1, mRNA sequence.
FG840251.1:288-307
TGGAAGGGCGCCTGCTTCTACCAGAACAAA288GCATGGATGGTGTTTCACAACAAGAGCCAAACTGAATATGGCGGCGGAAC
UCRVU07_CCNP12731_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP12731.b1, mRNA sequence.
FG878928.1:310-329
TGGAAGGGCGCCTGCTTCTACCAGAACAAA310GCATGGATGGTGTTTCACAACAAGAGCCAAACTGAATATGGCGGCGGAAC
Vigna angularis mRNA, clone: VES11P02.
HX946589.1:294-313
TGGAAGGGCGCCTGCTTCTACGAGAACAAA294GCATGGATGGTGTTTCACAACAAGAGCCAAACTGAATATGGCGGCGGAAC
seq3741 091111_plate_21f24.b1 Common bean full-length cDNA Library Phaseolus vulgaris cDNA 5', mRNA sequence.
JK040538.1:334-353
TGGAACGGCGCCTGCTTCTACAAGAACACA334GCATGGATGGTGTTTCACAACAAGAGCCTCCCTGAATATGGCGGCGGAAC
seq5968 091111_plate_2p06.b1 Common bean full-length cDNA Library Phaseolus vulgaris cDNA 5', mRNA sequence.
JK042364.1:364-383
TGGAAGGGCGCCTGCTTCTACAAGAACACA364GCATGGATGGTGTTTCACAACAAGAGCCTCACTGAATATGGCGGCGGAAC
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H088E13, *** SEQUENCING IN PROGRESS ***, 26 unordered pieces.
AC272337.1:68015-68034
TGGAAGGGCGCCTGCTTCTACCAGAACAAA68015GCATGGATGGTGTTTCACAACAAGAGCCAAACTGAATATGGCGGCGGAAC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu08.
CP039351.1:46389557-46389576
TGGAAGGGCGCCTGCTTCTACCAGAACAAA46389557GCATGGATGGTGTTTCACAACAAGAGCCAAACTGAATATGGCGGCGGAAC
Lasiommata megera genome assembly, chromosome: 11.
OV743318.1:9079521-9079540
ATAAGGATAGCCCGAGGCCAGAGAACTATG9079521GCATGGATGGTGTTTCACAATGAACTGTAAATTGATTTATTATTCTATTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTGAAACACCATCCATGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTGAAACACCATCCATGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.417 | 0.408 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTGAAACACCATCCATGC&k=0&no_gap=0&offset=0&limit=50
1.065 | 0.648 | search_minus_done; http://172.18.8.135:50400/match?q=GCATGGATGGTGTTTCACAA&k=0&no_gap=0&offset=0&limit=48
1.071 | 0.006 | cgi_end;

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