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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:25:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392549.1:5552686-5552705
GTGTTTTACACAGAATTTTATTTTCGGATT5552686TTGTGGGATTTTGAGATCATATAATGTCAGAGAACCGCTCTAATATGAGC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392550.1:22466554-22466573
AGGGTTACTTAGTTCATTTCTTTGCTTTAT22466554TTGTGGGATTTTGAGATCATGTAATCTCCTTATAGATACTTTTGGATTAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:3273193-3273212
AGGATTACTTATTTCCTTTCTTTGCTTTAT3273193TTGTGGGATTTTGAGATCATGTTATCTCATTATAAATACTTTTGGATCAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 4.
OX392559.1:22673599-22673618
AGGGTTACTTAGTTCATTTCTTTGCTTTAT22673599TTGTGGGATTTTGAGATCATGTAATCTCCTTATAGATACTTTTGGATTAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:19985389-19985408
TTAATCCAAAAGTATCTATAACGAGATTAC19985389ATGATCTCAAAATCCCACAAATAAAGCAAAGAAACAAAGTAACCCTCCTA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392551.1:24332727-24332746
TTAATCCAAAAGTATGTGTAACAAGATAAC24332727ATGATCTCAAAATCCCACAAAGAAAGGAAATAAGTAATCCTCTTAATGAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:18572765-18572784
CTAATCCAAAAGTATCTATAACGAGATTAC18572765ATGATCTCAAAATCCCACAAATATAGCAAAGAAACGAAGTAAGTAACCCT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392560.1:22827776-22827795
TTAATCCAAAAGTATGTGTAACAAGATAAC22827776ATGATCTCAAAATCCCACAAAGAAAGGAAATAAGTAATCCTCTTAATGAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 9.
OX392564.1:15179695-15179714
TTAATCCAAAAGTATCTATAACGAGATTAC15179695ATGATCTCAAAATCCCACAAATAAAGCAAAGAAACAAAGTAACCCTCCTA
Acer campestre genome assembly, chromosome: 4.
OX940802.1:26635530-26635549
ACCATCGGATTCTTTTGGACTTGGAGACTC26635530ATGATCTCAAAATCCCACAATTGCCACCCTTACTGAGCAGTTTCAGAAGT
Viscum album genome assembly, chromosome: B1.
OY728167.1:591130412-591130431
GAATACCCTTATCATCGTCTTAAAAAAACT591130412ATGATCTCAAAATCCCACAACAAACAACGAGGTTTAACTGAAATGAGGAA
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:5350265-5350284
TGGTGAACAAGGGATGTGACATGTTGGTGG5350265ATGATCTCAAAATCCCACAATGTTGGTACCAATTGCCACATAAGGGGTTA
Gonocerus acuteangulatus genome assembly, chromosome: 5.
OX328127.1:64050666-64050685
AATACAAATATTCTCTCACACCGGCAGAAA64050666ATGATCTCAAAATCCCACAACAGAAGCCGCAATACTCAATAACATTACAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTGGGATTTTGAGATCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTGGGATTTTGAGATCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.364 | 0.355 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTGGGATTTTGAGATCAT&k=0&no_gap=0&offset=0&limit=50
0.447 | 0.083 | search_minus_done; http://172.18.8.135:50400/match?q=ATGATCTCAAAATCCCACAA&k=0&no_gap=0&offset=0&limit=46
0.453 | 0.006 | cgi_end;

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