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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:25:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:34654748-34654768
TGAGACAATTCTAAAAGAAGATATTGCTAA34654748TTGTGTCAAAATTCAAGGTTTAAATTGTTGGAATCAATACAACGTTTCACT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143362.1:34670388-34670408
TGAGACAATTCTAAAAGAAGATATTGCTAG34670388TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:31998720-31998740
TGAGACAATTCTAAAAGAAGATATTGCTAA31998720TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:34488806-34488826
TGAGACAATTCTAAAAGAAGATATTGCTAA34488806TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus sylvestris genome assembly, chromosome: 5.
OU696507.1:34504464-34504484
TGAGACAATTCTAAAAGAAGATATTGCTAG34504464TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus domestica genome assembly, chromosome: 5.
OU696681.1:34065656-34065676
TGAGACAATTCTAAAAGAAGATATTGCTAA34065656TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus domestica genome assembly, chromosome: 5.
OU696681.1:34081314-34081334
TGAGACAATTCTAAAAGAAGATATTGCTAG34081314TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus domestica genome assembly, chromosome: 5.
OU744546.1:33649386-33649406
TGAGACAATTCTAAAAGAAGATATTGCTAA33649386TTGTGTCAAAATTCAAGGTTTAAATTGTTGGAATCAATACAACGTTTCACT
Malus domestica genome assembly, chromosome: 5.
OU744546.1:33707121-33707141
TGAGACAATTCTAAAAGAAGATATTGCTAA33707121TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus domestica genome assembly, chromosome: 5.
OU744957.1:34161148-34161168
TGAGACAATTCTAAAAGAAGATATTGCTAA34161148TTGTGTCAAAATTCAAGGTTTAAATTGTTGGAATCAATACAACGTTTCACT
Malus domestica genome assembly, chromosome: 5.
OU744957.1:34182983-34183003
TGAGACAATTCTAAAAGAAGATATTGCTAA34182983TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Malus domestica genome assembly, chromosome: 5.
OU744995.1:35116735-35116755
TGAGACAATTCTAAAAGAAGATATTGCTAA35116735TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAATCAATACAACGTTTCACT
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:6376666-6376686
TGAGACAATTCTAAAAGAAGATATTGCTAA6376666TTGTGTCAAAATTCAAGGTTTAAACTGTTGGAAACAATACAACGTTTCACT
Melanotus villosus genome assembly, chromosome: 1.
OY720418.1:13088441-13088461
GTATGCAAGATTTAAAACAATTTTTCCTTT13088441TTGTGTCAAAATTCAAGGTTTATTTGTGACATTACTAGTGTTTATGGTGTT
Ectropis crepuscularia genome assembly, chromosome: 17.
OY856355.1:16963423-16963443
TGTTACCGAATTTCAATTGAAATGTTTATT16963423TTGTGTCAAAATTCAAGGTTTTTTTTTTTTAATTTTTAATAAAAAAAAAAT
Chionomys nivalis genome assembly, chromosome: 11.
OX465459.1:64557225-64557245
ATGAAGATATTAAAACCACTATCCCAAAAC64557225AAACCTTGAATTTTGACACAAATGTGGTGGTTTGAATGAGAATGACATCCA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:11625343-11625363
AGTGAAACGTTGTATTGATTCCAACAGTTT11625343AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:11660318-11660338
AGTGAAACGTTGTATTGATTCCAACAGTTT11660318AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141931.1:12198111-12198131
AGTGAAACGTTGTATTGATTCCAACAATTT12198111AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:11623965-11623985
GGTGAAACATTGTATTGATTCCAACAGTTT11623965AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:11650747-11650767
AGTGAAACGTTGTATTGATTCCAACAGTTT11650747AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:12422421-12422441
GGTGAAACATTGTATTGATTCCAACAGTTT12422421AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:12459429-12459449
AGTGAAACGTTGTATTGATTCCAACAGTTT12459429AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:11892240-11892260
AGTGAAACGTTGTATTGATTCCAACAGTTT11892240AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Malus x robusta genome assembly, chromosome: 2.
OY720326.1:11914077-11914097
AGTGAAACGTTGTATTGATTCCAACAATTT11914077AAACCTTGAATTTTGACACAATTAGCAATATCTTCTTTTAGAATTGTCTCA
Pyrus communis genome assembly, chromosome: 2.
OY757069.1:9416288-9416308
AGTGAAACGTTGTATTAATTCCAACAGTTT9416288AAACCTTGAATTTTGACACAATTAGCAATCTTCTTTTAGAATTGTCTCACA
Maratus speciosus genome assembly, chromosome: 2.
OZ010788.1:309245640-309245660
CTCTTCCAATTGCCTCTATAAAATAGACTT309245640AAACCTTGAATTTTGACACAATTTTCTAAAAGATTTTTAGATTTTATAGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTGTCAAAATTCAAGGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTGTCAAAATTCAAGGTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.159 | 0.150 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTGTCAAAATTCAAGGTTT&k=0&no_gap=0&offset=0&limit=50
0.271 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCTTGAATTTTGACACAA&k=0&no_gap=0&offset=0&limit=35
0.279 | 0.008 | cgi_end;

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