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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-10 09:30:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 4, clone: LjT29M06, TM1286.
AP007960.2:100461-100480
CGACATCCACCGCCTTCTATCATTACCTTC100461TTGTGTTTGGATGATGTAGCTTAGTTTATGTTCTTTTTAGCTTTGCTCTT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT15N19, TM0097b.
AP004536.1:43543-43562
CGACATCCACCGCCTTCTATCATTACCTTC43543TTGTGTTTGGATGATGTAGCTTAGTTTATGTTCTTTTTAGCTTTGCTCTT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:11525821-11525840
CGACATTCAACGTATTATGTCATTATCTTC11525821TTGTGTTTGGATGATGTAGCTTAATTTTCTGTTCCTTTTAGCCTTCCTCT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:18523275-18523294
CGACATCCACCGTCTTCTGTCATTGCCTCC18523275TTGTGTTTGGATGATGTAGCTTAGTTCATTTTCTCTTTTAGACTTTCTCT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:82723947-82723966
CGACATCCACCGCCTTCTATCATTACCTTC82723947TTGTGTTTGGATGATGTAGCTTAGTTTATGTTCTTTTTAGCTTTGCTCTT
Noctua janthina genome assembly, chromosome: 14.
OY755064.1:1032459-1032478
GGTAACCTTTTCGGTCCCTGACAAAATATT1032459TTGTGTTTGGATGATGTAGCAATGATTTCAAACGAAAATTGTTATTAGTG
Lotus japonicus genomic DNA, clone: LjT45I18, TM1472.
AP010201.1:121921-121940
AGAGGAAGGCTAAAAGGAACAGAAAATTAA121921GCTACATCATCCAAACACAAGAAGATAATGACATAATACGTTGAATGTCG
Alisma plantago-aquatica genome assembly, chromosome: 6.
OY856414.1:576214071-576214090
TCAAAACGTCGAAGTGGATTGTCTTGCAAA576214071GCTACATCATCCAAACACAAATATTGTTGTCTATGAAACTCCTCCTATGG
Abrostola tripartita genome assembly, chromosome: 10.
HG996496.1:3140271-3140290
ATCGATCGTAATTAAGCACGTAGATTTAAC3140271GCTACATCATCCAAACACAATAATTTGACATCGCTAAATTGATTTATCTG
Noctua janthe genome assembly, chromosome: 14.
OU342566.1:17317010-17317029
CACTAATAACAATTTTCGTTTGAAATCATT17317010GCTACATCATCCAAACACAAAATATTTTGTCAGGGACCGAAAAGGTTACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTGTTTGGATGATGTAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTGTTTGGATGATGTAGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.269 | 0.260 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTGTTTGGATGATGTAGC&k=0&no_gap=0&offset=0&limit=50
0.399 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=GCTACATCATCCAAACACAA&k=0&no_gap=0&offset=0&limit=44
0.402 | 0.003 | cgi_end;

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