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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:51:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:888279-888302
AATTTTGGTTTTTTATTACTTTCTGTGTAA888279TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141976.1:888279-888302
AATTTTGGTTTTTTATTACTTTCTGTGTAA888279TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:916397-916420
AATTTTGGTTTTTTATTACTTTCTGTGTAA916397TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:925815-925838
AATTTTGGTTTTTTATTACTTTCTGTGTAA925815TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143381.1:858235-858258
AATTTTGGTTTTTTATTACTTTCTGTGTAA858235TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus sylvestris genome assembly, chromosome: 7.
OU696509.1:1001701-1001724
TCAATTTTGGTTTTTTATTACTTTGTGTAA1001701TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus domestica genome assembly, chromosome: 7.
OU696683.1:1040885-1040908
AATTTTGGTTTTTTATTACTTTCTGTGTAA1040885TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus domestica genome assembly, chromosome: 7.
OU744548.1:858393-858416
AATTTTGGTTTTTTGTTACTTTCTGTGTAA858393TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus domestica genome assembly, chromosome: 7.
OU744959.1:1070952-1070975
AATTTTGGTTTTTTATTACTTTCTGTGTAA1070952TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus domestica genome assembly, chromosome: 7.
OU744959.1:1077869-1077892
AATTTTGGTTTTTTATTACTTTCTGTGTAA1077869TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus domestica genome assembly, chromosome: 7.
OU744997.1:1074120-1074143
AATTTTGGTTTTTTATTACTTTCTGTGTAA1074120TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus domestica genome assembly, chromosome: 7.
OU744997.1:1081037-1081060
AATTTTGGTTTTTTATTACTTTCTGTGTAA1081037TTGTTGAATATCTTGTTTGTGTGCATATTGTTATGGCATAATATTTCTTATATT
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:36322634-36322657
AATATAAGAAATATTATGCCATAACAATAT36322634GCACACAAACAAGATATTCAACAATTACACAGAAAGTAATAAAAAACCAAAATT
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:35046694-35046717
AATATAAGAAATATTATGCCATAACAATAT35046694GCACACAAACAAGATATTCAACAATTACACAGAAAGTAACAAAAAACCAAAATT
Malus x robusta genome assembly, chromosome: 10.
OY720334.1:33370262-33370285
AATATAAGAAATATTATGCCATAACAATAT33370262GCACACAAACAAGATATTCAACAATTACACAGAAAGTAATAAAAAACCAAAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTTGAATATCTTGTTTGTGTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTTGAATATCTTGTTTGTGTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.174 | 0.165 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTTGAATATCTTGTTTGTGTGC&k=0&no_gap=0&offset=0&limit=50
0.290 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=GCACACAAACAAGATATTCAACAA&k=0&no_gap=0&offset=0&limit=38
0.292 | 0.002 | cgi_end;

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