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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:16:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arctium minus genome assembly, chromosome: 1.
OX941080.1:184802773-184802792
CACGTCAGTATGTGGAAAGAATAGAAGAAC184802773TTGTTGGTGTGCCAATTCATTACATTGGCATTGGACCTGGACGCGATGCT
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:747838023-747838042
ACAAAGAAATTATCCTAACAGATTGGGATG747838023TTGTTGGTGTGCCAATTCATGCACTTACTATTAGTGATAATGAAATCATG
Logfia minima genome assembly, chromosome: 3.
OY992765.1:20334013-20334032
CACGTCAATACGTTGAAAGAATAGAAGAAC20334013TTGTTGGTGTGCCAATTCATTACATTGGTGTTGGGCCCGGGCGTGATGCT
Pecten maximus genome assembly, chromosome: 18.
LR736855.1:29584883-29584902
TTCTAAATTGTGATTGTGCTTATTACGGTT29584883TTGTTGGTGTGCCAATTCATCATTGCACTTCCTGTATATATATTTACACT
Mimachlamys varia genome assembly, chromosome: 5.
OX392531.1:26898213-26898232
CATCCGTGGGAAATAGGAGGGAAAATGCCA26898213TTGTTGGTGTGCCAATTCATCAATGCTCCTGTATCTTAAACTGCTAAAAT
Polyploca ridens genome assembly, chromosome: 24.
OX596267.1:2567169-2567188
TGTATTTTAGCAAATGCCATAGGCACTTTA2567169TTGTTGGTGTGCCAATTCATAAAGTGCATTTGAAGGTTAGGTAAAGTGCC
Pseudognaphalium luteoalbum genome assembly, chromosome: 5.
OY730196.1:86659983-86660002
AGCATCACGCCCGGGCCCTACACCAATGTA86659983ATGAATTGGCACACCAACAAGTTCTTCTATTCTTTCAACGTACTGACGTG
Pecten maximus genome assembly, chromosome: 3.
LR736840.1:42006230-42006249
ACAACCAAATTAAAACAGATCAGTGGAATT42006230ATGAATTGGCACACCAACAATGATTGACATATAAACCAATGTAGTTAGAT
Gerris lacustris genome assembly, chromosome: 2.
OX578277.1:113008525-113008544
GGAATTTTTAAGGACAAACATGGTGCAAAA113008525ATGAATTGGCACACCAACAAAATCAAATATATGCTTGCACTTAGGGCGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTTGGTGTGCCAATTCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTTGGTGTGCCAATTCAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.167 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTTGGTGTGCCAATTCAT&k=0&no_gap=0&offset=0&limit=50
0.256 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=ATGAATTGGCACACCAACAA&k=0&no_gap=0&offset=0&limit=44
0.258 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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