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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:18:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Caprimulgus europaeus genome assembly, chromosome: 2.
OU015524.1:86035098-86035117
CCCCATCCCAGCTTGTCACAGGCAAGTCTG86035098TTGTTGTCCCACTCCCTCTTCAAGTCTAGTTTAAAGCCCTGTCAATGAGT
TSA: Elaeis guineensis isotig09578.Elguifruit mRNA sequence.
JO096805.1:560-579
AAAGAACGGTAATTGCGGATGACACTGCCC560TTGTTGTCCCACTCCCTCTTTTCCCCGGCGGCGGCGGCGGCGGCGGCGAG
Hibiscus tridactylites genome assembly, chromosome: 3.
OY288267.1:39442016-39442035
TATCGAATAATAAATACATAATATTAAGCC39442016TTGTTGTCCCACTCCCTCTTAGTTGTTAAGAGAACTGCAGATGTATTGAC
Hibiscus tridactylites genome assembly, chromosome: 7.
OY288271.1:40853321-40853340
TATCAAATAATAAATACATAATATTAAGCC40853321TTGTTGTCCCACTCCCTCTTAGTTGTTAAGAGAACTGCAGATGTATTGAC
Drosophila histrio genome assembly, chromosome: 3.
OY729166.1:10849842-10849861
TTTCCCTTTCTTCGTCATGCTTTAAACTGC10849842TTGTTGTCCCACTCCCTCTTTTCGCCATGCTCTGAACTGCTTGCTATCCC
Vespertilio murinus genome assembly, chromosome: 4.
OZ004707.1:96700791-96700810
AGGAAAGTGGACAGTGAATGCGCAGTATTT96700791AAGAGGGAGTGGGACAACAAAATATTTTTTCACCGAAGTCCGATCAATGC
Microcaecilia unicolor genome assembly, chromosome: 7.
LR594638.1:251129374-251129393
GGACCAATCTCTGCCTTCTGCACCCACTGA251129374AAGAGGGAGTGGGACAACAATAAATAATCAATGCGAGACCATGTGTGATG
Microcaecilia unicolor genome assembly, chromosome: 9.
LR594640.1:154079660-154079679
TGTGATCCCTTGCTGGTATCACACTCAGGG154079660AAGAGGGAGTGGGACAACAAGCATTGGGGTATTAAGGAGGTGTCTGCTCA
pOP-EO02978 EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02978 similar to Unknown protein, mRNA sequence.
ES324085.1:234-253
CTCGCCGCCGCCGCCGCCGCCGCCGGGGAA234AAGAGGGAGTGGGACAACAAGGGCAGTGTCATCCGCAATTACCGTTCTTT
pOP-EO02978_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02978 5', mRNA sequence.
EY413359.1:248-267
CTCGCCGCCGCCGCCGCCGCCGCCGGGGAA248AAGAGGGAGTGGGACAACAAGGGCAGTGTCATCCGCAATTACCGTTCTTT
PL_EST_PL2285 Plectus murrayi desiccated cDNA library Plectus murrayi cDNA 5', mRNA sequence.
FG621057.1:234-253
CTCGCCGCCGCCGCCGCCGCCGCCGGGGAA234AAGAGGGAGTGGGACAACAAGGGCAGTGTCATCCGCAATTACCGTTCTTT
Elaeis guineensis EST, clone (6lib)_isotig33192.
LM628273.1:283-302
CTCGCCGCCGCCGCCGCCGCCGCCGGGGAA283AAGAGGGAGTGGGACAACAAGGGCAGTGTCATCCGCAATTACCGTTCTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTTGTCCCACTCCCTCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTTGTCCCACTCCCTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.344 | 0.335 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTTGTCCCACTCCCTCTT&k=0&no_gap=0&offset=0&limit=50
0.719 | 0.375 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAGGGAGTGGGACAACAA&k=0&no_gap=0&offset=0&limit=45
0.724 | 0.005 | cgi_end;

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