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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 16:32:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lateolabrax maculatus chromosome Lm13.
CP027274.1:7983684-7983703
TATTATCTGTGAATTTTATCATCCAAAATG7983684TTGTTTCAAAGCCATGTCCATACTGACGGATATGTAACTGTGGTGGAGAA
Medicago truncatula clone mth2-11l3, complete sequence.
AC122161.26:93672-93691
ATCTTGATTGTTGTCTCTACCTTGAAAGAC93672TTGTTTCAAAGCCATGTCCATTAAATCGTCCTCTGTAAAAACTTTAAGAT
Medicago truncatula clone mth2-116k17, complete sequence.
AC149493.7:49889-49908
ATCTTGATTGTTGTCTCTACCTTGAAAGAC49889TTGTTTCAAAGCCATGTCCATTAAATCGTCCTCTGTAAAAACTTTAAGAT
Medicago truncatula clone mth2-52e11, complete sequence.
AC174290.6:57861-57880
ATCTTGATTGTTGTCTCTACCTTGAAAGAC57861TTGTTTCAAAGCCATGTCCATTAAATCGTCCTCTGTAAAAACTTTAAGAT
Cicer arietinum chromosome Ca2.
CP039332.1:2647668-2647687
AAATTGTCGGGAAGAGCATACCTCAAGAAC2647668TTGTTTCAAAGCCATGTCCATTAACTCATGCTCTGTAAATACTTTAAGGT
Cicer arietinum chromosome Ca2.
CP040767.1:2647664-2647683
AAATTGTCGGGAAGAGCATACCTCAAGAAC2647664TTGTTTCAAAGCCATGTCCATTAACTCATGCTCTGTAAATACTTTAAGGT
Trifolium repens isolate ACLI19 chromosome 02_Occ.
CP125838.1:8203213-8203232
TGAATTGTTCTCTTTAGTACCCTGAAAGAC8203213TTGTTTCAAAGCCATGTCCATTAACTCCTCCTCTGTAAAAACTTTAAGGT
Trifolium repens isolate ACLI19 chromosome 02_Pall.
CP125839.1:9131292-9131311
ATTATTATTATTAGGTTGGTTGAAAAAGAC9131292TTGTTTCAAAGCCATGTCCATTAACTCCTCCTCTGTAAAAACTTTAAGGT
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:64787578-64787597
TGGATTGTTCTCTTTTGTACCCTGAAAGAC64787578TTGTTTCAAAGCCATGTCCATTAACTCCTCTTCTGTAAAAACTTTAAGGT
Medicago arabica genome assembly, chromosome: 5.
OX326968.1:62595480-62595499
ATCTTGATTGTTGTCTCTACTTTGAAAGAC62595480TTGTTTCAAAGCCATGTCCATTAACTCGTCCTCGGTAAAAACTTTAAGAT
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:36587882-36587901
ATTTTCGGTGTTCTGTTTACAGTGAAAGAC36587882TTGTTTCAAAGCCATGTCCATTAATTCGTCCTCTGTAAAAACTTTAAGGT
Trifolium fragiferum genome assembly, chromosome: 4.
OX940792.1:62819289-62819308
TGGATTGTTCTCTTTTGTACCCTGAAAGAC62819289TTGTTTCAAAGCCATGTCCATTAACTCATCCTCTGTAAAAACTTTAAGAT
Myrica gale genome assembly, chromosome: 22.
OZ005619.1:16058061-16058080
CGGTTCTCAAGGGATGAGTCGCCTATTTTT16058061TTGTTTCAAAGCCATGTCCATAAGTTATGTCATTTGGATGACTACCACCA
Lathyrus sativus genome assembly, chromosome: 4.
OZ012738.1:678931097-678931116
ATTTTCATTGTTCTCTTTATCTTGAAAGAC678931097TTGTTTCAAAGCCATGTCCATCAAATCATCATCTGTATAGACTTTAAGGT
Lathyrus aphaca genome assembly, chromosome: 4.
OZ014522.1:572062268-572062287
ATTTTCATTGTTCTCTTTATCCCGAAAGAC572062268TTGTTTCAAAGCCATGTCCATCAAATCATCATCTGTATAGACTTTAAGGT
Tenthredo notha genome assembly, chromosome: 4.
OU611909.1:11292304-11292323
GAGGCTAGGTAAACCCTCGACAAAACCCTT11292304TTGTTTCAAAGCCATGTCCACAAATGTACATAAATTATCTCTATTCACAC
Cervus elaphus genome assembly, chromosome: 18.
OU343095.1:91543743-91543762
AAATGCTTTACGCCTTCAAGAACTACAGTA91543743TGGACATGGCTTTGAAACAACCAAGGTACAATTAAGTTGGATCTACAAAT
EST507581 KV3 Medicago truncatula cDNA clone pKV3-48G9 5' end, mRNA sequence.
BG645962.1:236-255
ATCTTAAAGTTTTTACAGAGGACGATTTAA236TGGACATGGCTTTGAAACAAGTCTTTCAAGGTAGAGACAACAATCAAGAT
MTYD046TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV256750.1:762-781
ATCTTAAAGTTTTTACAGAGGACGATTTAA762TGGACATGGCTTTGAAACAAGTCTTTCAAGGTAGAGACACAATCAAGATC
Trifolium repens mRNA, clone: WCC07a03_033, unspecified EST.
FY456416.1:477-496
ACCTTAAAGTTTTTACAGAGGAGGAGTTAA477TGGACATGGCTTTGAAACAAGGTACTACAAAAGAGAACAATCCACCACTT
MBEMJ33TF mth2 Medicago truncatula genomic clone 2E18, genomic survey sequence.
CG968302.1:777-796
ATCTTAAAGTTTTTACAGAGGACGATTTAA777TGGACATGGCTTTGAAACAAGTCTTTCAAGGTAGAGACAACAATCAAGAT
Medicago truncatula clone mth2-23b18, complete sequence.
AC122171.24:24935-24954
ATCTTAAAGTTTTTACAGAGGACGATTTAA24935TGGACATGGCTTTGAAACAAGTCTTTCAAGGTAGAGACAACAATCAAGAT
Trifolium repens microsatellite agr1066 sequence.
AY178349.1:750-769
ACCTTAAAGTTTTTACAGAGGAGGAGTTAA750TGGACATGGCTTTGAAACAAGGTAAGCTT
Medicago truncatula clone JCVI-FLMt-20H11 unknown mRNA.
BT135029.1:762-781
ATCTTAAAGTTTTTACAGAGGACGATTTAA762TGGACATGGCTTTGAAACAAGTCTTTCAAGGTAGAGACAACAATCAAGAT
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:391953-391972
ATCTTAAAGTTTTTACAGAAGACGAGTTAA391953TGGACATGGCTTTGAAACAAGTCTTTCAGGGTAGAGATGACAATCAAAAT
Astragalus glycyphyllos genome assembly, chromosome: 8.
OY754314.1:537188-537207
ATCTTAAAGTTTTTACAGAGGATGAGTTAA537188TGGACATGGCTTTGAAACAAGTCTTTGAGGTCCTCTTTTTTTATAATCTT
Myrica gale genome assembly, chromosome: 19.
OZ005616.1:7423917-7423936
TGGTGGTAGTCATCCAAATGACGTAACTTA7423917TGGACATGGCTTTGAAACAAAAAATAGGCGACTCAACCCTTGAGAATGGT
Myrica gale genome assembly, chromosome: 24.
OZ005621.1:7030354-7030373
AACACCCCTACATCCAAATGACGTAACTTA7030354TGGACATGGCTTTGAAACAAAAAAGTAGGCGACTCATCCCGGTCCTCAAT
Tenthredo mesomela genome assembly, chromosome: 1.
OX031013.1:48000564-48000583
GTGTGAATAGAGATAATTTATGTACATTTG48000564TGGACATGGCTTTGAAACAAAAGGGTTTTGTCGAGGGTTCACCTTGCCTC
Fissipunctia ypsillon genome assembly, chromosome: 14.
OX387657.1:22391808-22391827
CCATATGATCATTATGTTGGACTTGGAGCA22391808TGGACATGGCTTTGAAACAACGAAAAAGTGTCTCCTCACTAAGAAAAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTTTCAAAGCCATGTCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTTTCAAAGCCATGTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTTTCAAAGCCATGTCCA&k=0&no_gap=0&offset=0&limit=50
0.328 | 0.211 | search_minus_done; http://172.18.8.135:50400/match?q=TGGACATGGCTTTGAAACAA&k=0&no_gap=0&offset=0&limit=34
0.337 | 0.009 | cgi_end;

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