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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 10:20:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Prunus dulcis DNA, pseudomolecule Pd06.
AP019302.1:1389342-1389361
GACCCTTCTTTGTAGTAAGTTGGCGAAGTA1389342TTGTTTCGGGCTTTGTCTTCCCTACAGTTGGTTCCCCACTAAGAAGAGCA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2475465-2475484
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2475465TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2433568-2433587
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2433568TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2533196-2533215
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2533196TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2630453-2630472
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2630453TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2472938-2472957
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2472938TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2499998-2500017
GGCCCTTCTTGGTTGTAAGTTGGCGAAGTA2499998TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2588270-2588289
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2588270TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2581599-2581618
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2581599TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2637108-2637127
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2637108TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2677059-2677078
GGCCCTTCTTGGTAGTAAGTTGGCGAAGTA2677059TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2652258-2652277
GGCCCTTCTTGGTAGTAAGTTGGCAAAGTA2652258TTGTTTCGGGCTTTGTCTTCCCTATGGTTGGTTCACCCCTAAGAAGAGAA
Hibiscus tridactylites genome assembly, chromosome: 13.
OY288277.1:2822217-2822236
GTCCCTTCTTGGTTGTGAGTTGCCTAAGTA2822217TTGTTTCGGGCTTTGTCTTCCCTTTAGTTGGTTCTCCGCTGAAACAATTA
Erodium maritimum genome assembly, chromosome: 6.
OY997593.1:28409547-28409566
GGGGAGCGACTCTGTGATTTTCTGGTGGTG28409547TTGTTTCGGGCTTTGTCTTCCTTTCTTCGTCACTTCGCACTGTGCTGTCC
PPN072F08-T7 PPN Prunus persica cDNA clone PPN072F08, mRNA sequence.
FC863704.1:99-118
TGACAGGAAGACTGGGGAACCAACTGTAGG99GAAGACAAAGCCCGAAACAATACTTCGCCAACTTACTACAAAGAAGGGTC
Quercus dentata isolate Qdleaves-2020 chromosome 1.
CP116444.1:5796566-5796585
CTATGACTTCAGTGGTGAGCCAACTACGGG5796566GAAGACAAAGCCCGAAACAATACTTCGACAACTTACAACCAAGAAGGGAC
Quercus variabilis isolate HB chromosome 1b.
CP129433.1:5797519-5797538
CTATGACTTCAGTGGTGAGCCAACTACAGG5797519GAAGACAAAGCCCGAAACAATACTTCGGCAACTTACAACCAAGAAGGGAC
Quercus variabilis isolate HB chromosome 1a.
CP129445.1:6984377-6984396
CTATGACTTCAGTGGTGAGCCAACTACAGG6984377GAAGACAAAGCCCGAAACAATACTTCGGCAACTTACAACCAAGAAGGGAC
Impatiens glandulifera genome assembly, chromosome: 5.
OU015485.1:16360786-16360805
ATAGGATGCTTCGTAGCAAAAGGAATGGAA16360786GAAGACAAAGCCCGAAACAACACCGTTTCTCAAGGTTCTACTCATGGTTG
Fagus sylvatica genome assembly, chromosome: 10.
OU015770.1:2890288-2890307
CTGTATCTTCAGTGGTGAGCCAACTACAGG2890288GAAGACAAAGCCCGAAACAATACTTCGGCAACTTACAACCAAGAAGGGAC
Quercus robur genome assembly, chromosome: 1.
OW028765.1:5928943-5928962
CTATGACTTCAGTGGTGAGCCAACTACGGG5928943GAAGACAAAGCCCGAAACAATACTTCGGCAACTTACAACCAAGAAGGGAC
Hibiscus tridactylites genome assembly, chromosome: 11.
OY288275.1:93950865-93950884
TAATTGTTTCAGTGGAGAACCAACTAAAGG93950865GAAGACAAAGCCCGAAACAATACTTAGGCAACTCACAACCAAGAAGGGAC
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38659168-38659187
TTCTCTTCTTAGGGGTGAACCAACCATAGG38659168GAAGACAAAGCCCGAAACAATACTTCGCCAACTTACTACCAAGAAGGGCC
Quercus cerris genome assembly, chromosome: 6.
OY770011.1:5767793-5767812
CTATGACTTCAGTGGTGAGCCAACTACAGG5767793GAAGACAAAGCCCGAAACAATACTTCGGCAACTTACAACCAAGAAGGGAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTGTTTCGGGCTTTGTCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTGTTTCGGGCTTTGTCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.374 | 0.365 | search_plus_done; http://172.18.8.135:50400/match?q=TTGTTTCGGGCTTTGTCTTC&k=0&no_gap=0&offset=0&limit=50
0.543 | 0.170 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGACAAAGCCCGAAACAA&k=0&no_gap=0&offset=0&limit=36
0.550 | 0.007 | cgi_end;

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