GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-19 06:53:35, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Caradrina clavipalpis genome assembly, chromosome: 21.
OW052108.1:5407882-5407901
AAACGTGTGCATCAACCTCGACAGATATTG5407882TTTAAAAGGCAAACGGCAACATTAAAAACTGAAAATATTGGTTGCTAAGC
Athripsodes cinereus genome assembly, chromosome: 11.
OX388315.1:22649055-22649074
ATGAACTAATATACATCACACACGATGCAA22649055TTTAAAAGGCAAACGGCAACGATGTACAAAGATTGTAAATATAGCCCGTA
Orbicella franksi genome assembly, chromosome: 10.
OZ116707.1:1160859-1160878
TTGTAAACAATGATTTCCCTGTACCACAGT1160859TTTAAAAGGCAAACGGCAACACCGTCCTCAGACCCAGTCTGTAGGCGTAC
Rhynchopelta concentrica genome assembly, chromosome: 12.
OZ199109.1:15552617-15552636
CATTTACACGATTTGCTTCTACTAGAAATG15552617TTTAAAAGGCAAACGGCAACAATGGAATCGTTTATAAAGAGTATTCCATG
Podarcis lilfordi genome assembly, chromosome: 12.
OX395137.1:57193017-57193036
CACGTACAGCAATCTGTGGAGTGCCTCTTT57193017TTTAAAAGGCAAACGGCAACATTGAAAAGTGGTTTTTGTTTTGTTTTTGT
Zelleria hepariella genome assembly, chromosome: 7.
OX439385.1:20838757-20838776
CACGAGCGTCAACGATAACAAAGTGTCTCC20838757GTTGCCGTTTGCCTTTTAAAATTAATCCAGTCTATTATTTTGCAAAGTGC
Pseudopanthera macularia genome assembly, chromosome: 7.
OZ178023.1:24371188-24371207
TAACTCCAATTCTCTTTTAATTTCATTTCA24371188GTTGCCGTTTGCCTTTTAAATATATGTATATATTTTAAATTATCATGAAG
Podarcis pityusensis genome assembly, chromosome: 12.
OZ067014.1:2006943-2006962
ACAAAAACAAAACAAAAACCACTTTTCAAT2006943GTTGCCGTTTGCCTTTTAAAAAAGAGGCACTCCACAGATTGCTGTACGTG
Podarcis pityusensis genome assembly, chromosome: 12.
OZ067049.1:1960730-1960749
ACAAAAACAAAACAAAAACCACTTTTCAAT1960730GTTGCCGTTTGCCTTTTAAAAAAGAGGCACTCCACAGATTGCTGTACGTG
Bombina variegata genome assembly, chromosome: 5.
OZ123719.1:841260756-841260775
GTTAAAGTGAAATATCACTGCTTAGCACCT841260756GTTGCCGTTTGCCTTTTAAAGCAACATTGTAATCAAGAATTGTCTGTCAT
Bombina variegata genome assembly, chromosome: 5.
OZ123731.1:857510262-857510281
GTTAAAGTGAAATATCACTGCTTAGCACCT857510262GTTGCCGTTTGCCTTTTAAAGCAACATTGTAATCAAGAATTGTCTGTCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTAAAAGGCAAACGGCAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTAAAAGGCAAACGGCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.083 | search_plus_done; http://172.18.8.135:50800/match?q=TTTAAAAGGCAAACGGCAAC&k=0&no_gap=0&offset=0&limit=50
0.110 | 0.017 | search_minus_done; http://172.18.8.135:50800/match?q=GTTGCCGTTTGCCTTTTAAA&k=0&no_gap=0&offset=0&limit=45
0.114 | 0.004 | cgi_end;

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