GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 16:36:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Platichthys flesus genome assembly, chromosome: 4.
OX438719.1:7286229-7286249
AGAGCAGACACCCCCACCAAGGTAATTCAA7286229TTTAAATTGAGAACATCCAGATTTGTATTTGAACTAAACACACTCTTAAAT
Rattus norvegicus clone CH230-unknown, WORKING DRAFT SEQUENCE, 7 unordered pieces.
AC137415.1:117495-117515
GTAGTAACATTAAATATCAGATGAAAGTCA117495TTTAAATTGAGAACATCCAGATCTGTCAGACCATTCACAAATATTAGAACC
Lotus japonicus genomic DNA, chromosome 5, clone: LjT09M14, TM1662.
AP008202.2:25582-25602
TATCTCTATTCTCTATGAGAGATAATTATA25582TTTAAATTGAGAACATCCAGATCATGTGAGATTAACTCTTTCAACAAAGTG
Lotus japonicus genomic DNA, chromosome 5, clone: LjT33L13, TM0327.
AP006430.1:41771-41791
TATCTCTATTCTCTATGAGAGATAATTATA41771TTTAAATTGAGAACATCCAGATCATGTGAGATTAACTCTTTCAACAAAGTG
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:64377054-64377074
TATCTCTATTCTCTATGAGAGATAATTATA64377054TTTAAATTGAGAACATCCAGATCATGTGAGATTAACTCTTTCAACAAAGTT
Mycoplasma canis strain NCTC10146 genome assembly, chromosome: 1.
LR215010.1:95892-95912
CTTCCACTTATTTTCAAAAGAACAAGTTGA95892TTTAAATTGAGAACATCCAGATACAATAGCTGCTATGGTCGATGTTATTAA
Pleuronectes platessa genome assembly, chromosome: 5.
OX374652.1:22995222-22995242
ATTTAAGAGTGTGTGTAGTTCAAATACAAA22995222TCTGGATGTTCTCAATTTAAATGTAGGGGGACTGTCGGGCCTTGGTGGAGG
Mycoplasma canis strain LV, complete genome.
CP011368.1:675736-675756
TTAATAACATCGACCATAGCAGCTATTGTA675736TCTGGATGTTCTCAATTTAAATCAACTTGTTCTTTTGAAAATAAGTGGAAG
Mycoplasmopsis canis PG 14, complete genome.
CP014281.1:644182-644202
TTAATAACATCGACCATAGCAGCTATTGTA644182TCTGGATGTTCTCAATTTAAATCAACTTGTTCTTTTGAAAATAAGTGGAAG
Mycoplasmopsis canis strain 58334 chromosome, complete genome.
CP141037.1:236364-236384
TTAATAACATCGACCATAGCAGCTATTGTA236364TCTGGATGTTCTCAATTTAAATCAACTTGTTCTTTTGAAAATAAGTGGAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTAAATTGAGAACATCCAGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTAAATTGAGAACATCCAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=TTTAAATTGAGAACATCCAGA&k=0&no_gap=0&offset=0&limit=50
0.126 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGGATGTTCTCAATTTAAA&k=0&no_gap=0&offset=0&limit=44
0.129 | 0.003 | cgi_end;

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