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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 07:55:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mdlr7002K15_e24057.b1 Apple_EST_Mdlr Malus domestica cDNA 3' similar to ref|NP_198106.1| GTP-binding protein - related [Arabidopsis thaliana] gb|AAL91169.1| unknown protein [Arabidopsis thaliana] gb|A
GO557465.1:194-216
AACTCGACTGGTACTTCATCCTTAATCCTT194TTTAACTGGAGGCGTTCTTCCTCGCTGCATAGACTCGGTAAGCCGCCACTCCA
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:28329674-28329696
AACTCGACTGGTACTTCATCCTTAATCCTT28329674TTTAACTGGAGGCGTTCTTCCTCGCAGCATAGACTCGGTAAGCCGCCACTCCA
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:28779396-28779418
AACTCGACTGGTACTTCATCCTTAATCCTT28779396TTTAACTGGAGGCGTTCTTCCTCGCAGCATAGACTCGGTAAGCCGCCACTCCA
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143386.1:26665133-26665155
AACTCGACTGGTACTTCATCCTTAATCCTT26665133TTTAACTGGAGGCGTTCTTCCTCGCAGCATAGACTCGGTAAGCCGCCACTCCA
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:28984052-28984074
AACTCGACTGGTACTTCATCCTTAATCCTT28984052TTTAACTGGAGGCGTTCTTCCTCGCTGCATAGACTCGGTAAGCCGCCACTCCA
Malus domestica genome assembly, chromosome: 12.
OU696688.1:28854035-28854057
AACTCGACTGGTACTTCATCCTTAATCCTT28854035TTTAACTGGAGGCGTTCTTCCTCGCTGCATAGACTCGGTAAGCCGCCACTCCA
Malus domestica genome assembly, chromosome: 12.
OU744553.1:29583245-29583267
AACTCGACTGGTACTTCATCCTTAATCCTT29583245TTTAACTGGAGGCGTTCTTCCTCGCTGCATAGACTCGGTAAGCCGCCACTCCA
Malus domestica genome assembly, chromosome: 12.
OU744964.1:28742641-28742663
AACTCGACTGGTACTTCATCCTTAATCCTT28742641TTTAACTGGAGGCGTTCTTCCTCGCTGCATAGACTCGGTAAGCCGCCACTCCA
Malus domestica genome assembly, chromosome: 12.
OU745002.1:28786970-28786992
AACTCGACTGGTACTTCATCCTTAATCCTT28786970TTTAACTGGAGGCGTTCTTCCTCGCTGCATAGACTCGGTAAGCCGCCACTCCA
010512AAWA001806HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA001806, mRNA sequence.
CN887361.1:369-391
TGGAGTGGCGGCTTACCGAGTCTATGCTGC369GAGGAAGAACGCCTCCAGTTAAAAAGGATTAAGGATGAAGTACCAGTCGAGTT
fl_03H06_BA1 Md_fruit-leaf_subtractive_cDNA_library Malus domestica cDNA, mRNA sequence.
GD254899.1:193-215
TGGAGTGGCGGCTTACCGAGTCTATGCAGC193GAGGAAGAACGCCTCCAGTTAAAAAGGATTAAGGATGAAGT
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:3421211-3421233
TGGAGTGGCGGCTTACCGAGTCTATGCTGC3421211GAGGAAGAACGCCTCCAGTTAAAAAGGATTAAGGATGAAGTACCAGTCGAGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTAACTGGAGGCGTTCTTCCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTAACTGGAGGCGTTCTTCCTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.195 | 0.187 | search_plus_done; http://172.18.8.135:50400/match?q=TTTAACTGGAGGCGTTCTTCCTC&k=0&no_gap=0&offset=0&limit=50
0.327 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGAAGAACGCCTCCAGTTAAA&k=0&no_gap=0&offset=0&limit=41
0.329 | 0.002 | cgi_end;

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