GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 15:09:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Haemophilus parainfluenzae strain M1C152_1 chromosome, complete genome.
CP063111.1:1139066-1139085
CGTTTTAGAGACAGATTTAGAAAACGAGCA1139066TTTAAGCATCCAATGGCAAAATAATGTGCCTGTGATTCATTACTATCATT
Haemophilus parainfluenzae strain M1C149_1 chromosome, complete genome.
CP063112.1:1149373-1149392
CGTTTTAGAAACAGATTTAGAAAACGAGCA1149373TTTAAGCATCCAATGGCAAAATAATGTGCCTGTGATTCATTACTATCATT
Haemophilus parainfluenzae strain M1C125_4 chromosome, complete genome.
CP063122.1:1095622-1095641
CGTTTTAGAAACAGATTTAGAAAATGAGCA1095622TTTAAGCATCCAATGGCAAAATAATGTGCCAGTGATTCATTACTATCATT
Glyphotaelius pellucidus genome assembly, chromosome: 11.
OW386548.1:11890450-11890469
CTATTTGTGCTTTTAATAATAATGAGTTGA11890450TTTAAGCATCCAATGGCAAACTTCAGTCCATTTGCAGGTGTAACGGTAAT
TSA: Allium cepa CUDHLF2_10676 mRNA sequence.
JR853494.1:100-119
ACAACAACAATGCAAACATACTCGAATTCC100TTTGCCATTGGATGCTTAAATCCATTTCCTTCTTCTGATGCTCTCGTTTT
Haemophilus parainfluenzae strain M27794 chromosome, complete genome.
CP031477.1:284395-284414
AATGATAATAATGAATCACAGGCACATTAT284395TTTGCCATTGGATGCTTAAATGCTCGTTTTCTAAATCTGTTTCTAAAACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTAAGCATCCAATGGCAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTAAGCATCCAATGGCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.092 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=TTTAAGCATCCAATGGCAAA&k=0&no_gap=0&offset=0&limit=50
0.123 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGCCATTGGATGCTTAAA&k=0&no_gap=0&offset=0&limit=46
0.125 | 0.001 | cgi_end;

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