GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-01-10 11:28:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:13130927-13130950
CAAAAGTCCCCATTTCTCTGGCACAACAAA13130927TTTCACCACAAAGATGTATGTAAAAGAGAATCTAGATATGAATATCAAACAATT
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:13131243-13131266
CAAAAGTCCCCATTTCTCTGGCACAACAAA13131243TTTCACCACAAAGATGTATGTAAAAGAGACAAGCCAGTTTCAGGATTTCAGTTA
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:13146916-13146939
CAAAAGTCCCCATTTCTCTGGCACAACAAA13146916TTTCACCACAAAGATGTATGTAAAAGAGAATCTAGATATGAATATCAAACAATT
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:13147232-13147255
CAAAAGTCCCCATTTCTCTGGCACAACAAA13147232TTTCACCACAAAGATGTATGTAAAAGAGACAAGCCAGTTTCAGGATTTCAGTTA
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:13149029-13149052
CAAAAATCCCCATTTCTCTGGCACAACAAG13149029TTTCACCACAAAGATGTATGTAAATGAGACAAACCAGTTTCAGGCTTTCAGCTA
Prunus dulcis DNA, unplaced-scaffold_1185.
AP021522.1:3276-3299
CAAAAGTCCCCATTTCTCTGGCACAACAAA3276TTTCACCACAAAGATGTATGTAAAAGAGAATCTAGATATGAATATCAAACAATT
Prunus dulcis DNA, unplaced-scaffold_1185.
AP021522.1:3591-3614
CAAAAGTCCCCATTTCTCTGGCACAACAAA3591TTTCACCACAAAGATGTATGTAAAAGAGACAAGCCAGTTTCAGGATTTCAGTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTACATACATCTTTGTGGTGAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTACATACATCTTTGTGGTGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.099 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=TTTACATACATCTTTGTGGTGAAA&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCACCACAAAGATGTATGTAAA&k=0&no_gap=0&offset=0&limit=50
0.120 | 0.005 | cgi_end;

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