GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 20:56:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pelobates cultripes genome assembly, chromosome: 02.
OW240913.1:51987518-51987537
CAAAAAAATAGAACATTACAGTAGTGCATT51987518TTTACATGACAGCACCAGGCTTTATGGTCAAACAGAGGACTAGTCTCTCT
Solanum melongena mRNA, clone: OVS02H05, 3'end, expressed in ovary at 5d pre-anthesis.
FS030427.1:49-68
TCAAGATTTTTCATTTTTCTACATAAAAAG49TTTACATGACAGCACCAGGCAGAGAAAAAAGGTACTACTACAATACCTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTACATGACAGCACCAGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTACATGACAGCACCAGGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.176 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=TTTACATGACAGCACCAGGC&k=0&no_gap=0&offset=0&limit=50
0.204 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTGGTGCTGTCATGTAAA&k=0&no_gap=0&offset=0&limit=48
0.204 | 0.000 | cgi_end;

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