GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-12 19:59:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Argyrosomus regius genome assembly, chromosome: 6.
OX336887.1:3595320-3595339
TCTAAAGTCCATTACACACTTGATCACACA3595320TTTAGCCTCCACAGCAGGATGCCGCTCCTCCCGTGATTCTGTGCAACGGC
CAIY7732.rev CAIY Artemisia annua leaf Artemisia annua cDNA clone CAIY7732 3', mRNA sequence.
EY045369.1:305-324
CATCAGAAATCCGTATCCGTATATGCTACT305TTTAGCCTCCACAGCAGGATCCGCATGCTGGAAGAGAGTTGTGGTCTATG
Elaeis guineensis EST, clone (6lib)_isotig32051.
LM626866.1:583-602
GCAAACGATCCAGAAAGATGTAAAATTGCA583TTTAGCCTCCACAGCAGGATCCACATGCAGGAAGAGAACTATGATCATTT
Elaeis guineensis EST, clone (6lib)_isotig38461.
LM634216.1:287-306
TGAAAAATGAACCACAAAAATGTACTCGTG287TTTAGCCTCCACAGCAGGATCCACATGCAGGAAGAGAACTATGGTCATTC
TSA: Artemisia annua strain Artemis Contig35070, mRNA sequence.
EZ175664.1:365-384
CATCAGAAATTCGTATCTGTATATGCTACT365TTTAGCCTCCACAGCAGGATCCGCATGCTGGAAGAGAGTTGTGGTCTATG
TSA: Artemisia annua strain Madagascar Contig19381.Mt mRNA sequence.
EZ292994.1:314-333
CATCAGAAATCCGTATCTGTATATGCTACT314TTTAGCCTCCACAGCAGGATCCGCATGCTGGAAGAGAGTTGTGGTCTATG
TSA: Artemisia annua strain Uganda Contig8532.Uhm mRNA sequence.
EZ341316.1:333-352
CATCAGAAATCCGTATCTGTATATGCTACT333TTTAGCCTCCACAGCAGGATCCGCATGCTGGAAGAGAGTTGTGGTCTATG
TSA: Elaeis guineensis isotig08908.Elguifruit mRNA sequence.
JO096138.1:225-244
GCAAACGATCCAGAAAGATGTAAAATTGCA225TTTAGCCTCCACAGCAGGATCCACATGCAGGAAGAGAACTATGATCATTT
TSA: Elaeis guineensis isotig10321.Elguifruit mRNA sequence.
JO097548.1:140-159
TGAAAAATGAACCACAAAAATGTACTCGTG140TTTAGCCTCCACAGCAGGATCCACATGCAGGAAGAGAACTATGGTCATTC
TSA: Rhynchophorus ferrugineus contig00591.Rhfeelpa mRNA sequence.
JR468054.1:255-274
ACATATGAACCAGAAAGAGGTACTCTTGTA255TTTAGCCTCCACAGCAGGATCCACAAGCAGGAAGAGAACTATGATCATTT
TSA: Rhynchophorus ferrugineus contig01680.Rhfeelpa mRNA sequence.
JR469143.1:192-211
TAAACGAACCAGAAAGATATTTTTTTTGTA192TTTAGCCTCCACAGCAGGATCCACATGCAGGAAGAGAACTATGGTCATTC
Chrysanthemum makinoi genome assembly, chromosome: 9.
OU343225.1:122686959-122686978
CATCAGAAATCCGTATCTGTATCTGCTACT122686959TTTAGCCTCCACAGCAGGATCCGCATGCTGGAAGAGAGTCTGCAAAGAGA
Pseudognaphalium luteoalbum genome assembly, chromosome: 4.
OY730195.1:26233085-26233104
TAGAAATATATGCACCTGTTCCTGCAACCT26233085TTTAGCCTCCACAGCAGGATCCACATGCTGGAAGTGAATCTACAGATAGA
Logfia minima genome assembly, chromosome: 10.
OY992772.1:15007773-15007792
CTAGAATATATGCACCTGTTTCTGGAACCT15007773TTTAGCCTCCACAGCAGGATCCGCATGCTGGAAGTGAATCTACAGAGTGA
Gnaphalium uliginosum genome assembly, chromosome: 3.
OZ005682.1:18359480-18359499
TTAGAATATATGCACCTTTTCCTGCAACTT18359480TTTAGCCTCCACAGCAGGATCCGCATGCTGGAAGTGAATCTACAGAGTGA
Rhodophaea formosa genome assembly, chromosome: 19.
OY720222.1:1032824-1032843
GTATTTAGTCATCATCACCATCAGGTCTTT1032824TTTAGCCTCCACAGCAGGATCATGACCCTATATGTACTACCAGAGCTGTA
EG-A01_007_E04 Oil palm normal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599645.1:320-339
AAATGATCATAGTTCTCTTCCTGCATGTGG320ATCCTGCTGTGGAGGCTAAATGCAATTTTACATCTTTCTGGATCGTTTGC
pOP-EON00478_EST_C_1_pSK_SK EON (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EON00478 similar to glycine-rich protein, mRNA sequence.
DW248194.1:308-327
AAATGATCATAGTTCTCTTCCTGCATGTGG308ATCCTGCTGTGGAGGCTAAATGCAATTTTACATCTTTCTGGATCGTTTGC
pOP-EON00936_EST_C_1_pSK_SK EON (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EON00936 similar to glycine-rich protein, mRNA sequence.
DW248603.1:306-325
AAATGATCATAGTTCTCTTCCTGCATGTGG306ATCCTGCTGTGGAGGCTAAATGCAATTTTACATCTTTCTGGATCGTTTGC
pOP-EON01003_EST_C_1_pSK_SK EON (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EON01003 similar to glycine-rich protein, mRNA sequence.
DW248665.1:308-327
AAATGATCATAGTTCTCTTCCTGCATGTGG308ATCCTGCTGTGGAGGCTAAATGCAATTTTACATCTTTCTGGATCGTTTGC
CAIY7732.fwd CAIY Artemisia annua leaf Artemisia annua cDNA clone CAIY7732 5', mRNA sequence.
EY045370.1:384-403
CATAGACCACAACTCTCTTCCAGCATGCGG384ATCCTGCTGTGGAGGCTAAAAGTAGCATATACGGATACGGATTTCTGATG
TSA: Artemisia annua strain Artemis Contig3960.Ac mRNA sequence.
EZ180484.1:21-40
AACTCTCTTCCAGCATGCGG21ATCCTGCTGTGGAGGCTAAAAGTAGCATATACAGATACGAATTTCTGATG
TSA: Artemisia annua strain Artemis Contig6445.Aml mRNA sequence.
EZ192888.1:370-389
CATAGACCACAACTCTCTTCCAGCATGCGG370ATCCTGCTGTGGAGGCTAAAAGTAGCATATACAGATACGGATTTCTGATG
TSA: Artemisia annua strain Artemis Contig16217.Aylt mRNA sequence.
EZ219206.1:412-431
CATAGACCACAACTCTCTTCCAGCATGCGG412ATCCTGCTGTGGAGGCTAAAAGTAGCATATACAGATACGAATTTCTGATG
TSA: Artemisia annua strain Artemis Contig2249.Amlt mRNA sequence.
EZ235579.1:173-192
CATAGACCACAACTCTCTTCCAGCATGCGG173ATCCTGCTGTGGAGGCTAAAAGTAGCATATACAGATACGAATTTCTGATG
TSA: Artemisia annua strain Madagascar Contig18542.Blt mRNA sequence.
EZ331996.1:343-362
ATAGTACCACAACTCTCTTCCAGCATGCGG343ATCCTGCTGTGGAGGCTAAAAGTAGC
TSA: Artemisia annua strain Uganda Contig12030.Uht mRNA sequence.
EZ364869.1:385-404
CATAGACCACAACTCTCTTCCAGCATGCGG385ATCCTGCTGTGGAGGCTAAAAGTAGCATATACAGATACGGATTTCTGATG
TSA: Artemisia annua strain Uganda Contig11057, mRNA sequence.
EZ394562.1:398-417
CATAGACCACAACTCTCTTCCAGCATGCGG398ATCCTGCTGTGGAGGCTAAAAGTAGCATATACAGATACGGATTTCTGATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).