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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:10:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Erithacus rubecula genome assembly, chromosome: 2.
LR812104.1:12068140-12068159
CCTTCCCCAGTATGTGGATGGTTTGGGTTT12068140TTTAGGGGTGGTGGGATTGTTTTTTTTTTTTGGTTTGGGTATTTTTTATC
Fringilla coelebs genome assembly, chromosome: 3.
OY740726.1:13267205-13267224
CCTTCCCAGGTATGTGGTTGGTTTGGGTTT13267205TTTAGGGGTGGTGGGATTGTTTTTAAGTTTGGTTCAGGGTTTTTTTAGTA
Trifolium pratense DNA, clone:RCG02748.
DE214305.1:40-59
TTGGATAGAAGATTTGTTTGTGGATTTAGG40TTTAGGGGTGGTGGGATTGTTGTTGTTTTCGTGGAGGAGGAGGATGAGCC
Trifolium pratense DNA, clone:RCG03929.
DE215271.1:40-59
TTGGATAGAAGATTTGTTTGTGGATTTAGG40TTTAGGGGTGGTGGGATTGTTGTTGTTTTCGTGGAGGAGGAGGATGAGCC
Trifolium pratense DNA, clone:RCG01068.
DE246714.1:40-59
TTGGATAGAAGATTTGTTTGTGGATTTAGG40TTTAGGGGTGGTGGGATTGTTGTTGTTTTCGTGGAGGAGGAGGATGAGCC
Trifolium fragiferum genome assembly, chromosome: 8.
OX940796.1:1674407-1674426
GATAGAAGATTTGTTGTTTGTTGATTTAGG1674407TTTAGGGGTGGTGGGATTGTTGCTTTCGTTGAGGAGGATGAGCCTCGGTG
Alnus glutinosa genome assembly, chromosome: 8.
OY340905.1:29166890-29166909
TTTAATAAATCAATTTTCAGCTTTTTACAC29166890TTTAGGGGTGGTGGGATTGTGGTGGGATGGGGGTGGGAATTCTAGCATTA
Philereme vetulata genome assembly, chromosome: 2.
OU975419.1:8133317-8133336
AACCTAAACACATCCACACTAATAATATTT8133317TTTAGGGGTGGTGGGATTGTGTTCCAACACTTGGTAGCATTGTTATCTGG
Philereme vetulata genome assembly, chromosome: 4.
OU975421.1:17582816-17582835
TAACCTAAACACATCAACATTAATAATAAT17582816TTTAGGGGTGGTGGGATTGTTTTCCAACACTTGGTAGCGGCATAGCGGAA
Philereme vetulata genome assembly, chromosome: 23.
OU975440.1:2563561-2563580
TTAACCTAAACACATCAACATTAATAATAT2563561TTTAGGGGTGGTGGGATTGTGTTCCATGACTTGGTAGCAGCATAGCGGAA
Philereme transversata genome assembly, chromosome: 2.
OZ004338.1:23748460-23748479
TAACCTAAACACATCAACATTAATAATATT23748460TTTAGGGGTGGTGGGATTGTGTTCCAACACTTGGTAGCGGTATAGCGAAA
Philereme transversata genome assembly, chromosome: 3.
OZ004339.1:19006298-19006317
AACCTAAACACATCAACATTAATAATATTT19006298TTTAGGGGTGGTGGGATTGTGTGCCAACACTTGGTAGCGGCATAGCGGAA
Philereme transversata genome assembly, chromosome: 4.
OZ004340.1:23620694-23620713
AACCTTAACACATCAACATTAATAATGTTT23620694TTTAGGGGTGGTGGGATTGTGTTCCTCCAACACTTGGTAGCGGCATAGCG
Philereme transversata genome assembly, chromosome: 17.
OZ004354.1:5310909-5310928
TAAACTAAACACATAAACATTAATGATATT5310909TTTAGGGGTGGTGGGATTGTGATACAACACGTGGTAGCGGCATAGCGGAA
Trifolium pratense DNA, clone:RCG01882.
DE213617.1:141-160
GGCTCATCCTCCTCCTCCACGAAAACAACA141ACAATCCCACCACCCCTAAACCTAAATCCACAAACAAATCTTCTATCCAA
Trifolium pratense DNA, clone:RCG01985.
DE213702.1:141-160
GGCTCATCCTCCTCCTCCACGAAAACAACA141ACAATCCCACCACCCCTAAACCTAAATCCACAAACAAATCTTCTATCCAA
Trifolium pratense DNA, clone:RCG02252.
DE213912.1:141-160
GGCTCATCCTCCTCCTCCACGAAAACAACA141ACAATCCCACCACCCCTAAACCTAAATCCACAAACAAATCTTCTATCCAA
Cordylochernes scorpioides isolate IN4F17 chromosome 14.
CP092876.1:18467252-18467271
TTGGAAATCAAAGATTTATATCACTCATCA18467252ACAATCCCACCACCCCTAAAGGAAAATTTATAAAAAAGAAGAAAACGGCA
Philereme vetulata genome assembly, chromosome: 11.
OU975428.1:8013232-8013251
TTGGCAGATTCCGCTACCATGTGTTGTAAC8013232ACAATCCCACCACCCCTAAAAAATATTATTTATTTTGATGTGTGATGTAT
Philereme vetulata genome assembly, chromosome: 24.
OU975441.1:10950788-10950807
AAATATTCGTGCACCATATAGTGTTGGAAC10950788ACAATCCCACCACCCCTAAACATATTATTAATGTTGATGTGTTTAGGTTA
Philereme vetulata genome assembly, chromosome: 32.
OU975449.1:2823935-2823954
TTCCACTATGCCACTACCAAGTGTTGGAAC2823935ACAATCCCACCACCCCTAAAAATATTATTAATGTTGATGTGTTTAGGTTA
Philereme vetulata genome assembly, chromosome: 53.
OU975470.1:836836-836855
TTCCGCTATGCCGCTACCAAGTGTTGGAAC836836ACAATCCCACCACCCCTAAAATATATTATTAATGTTGATGTGTTTAGGTT
Philereme vetulata genome assembly, chromosome: 53.
OU975470.1:889510-889529
TTCCGCTATGTCGCTACCAAGTGTTGGAAC889510ACAATCCCACCACCCCTAAAATATATTATTAATGTTGATGTGTTTAGTTT
Philereme transversata genome assembly, chromosome: 1.
OZ004337.1:11648456-11648475
TTCCGCTATACTGCTACCAAGTGTTGGAAC11648456ACAATCCCACCACCCCTAAAAAATATTATTAATGTTGATGTGTTTAGGTT
Philereme transversata genome assembly, chromosome: 7.
OZ004343.1:28319470-28319489
TTCCGCTATGCCGCTACCAAGTGTTGGAAC28319470ACAATCCCACCACCCCTAAAAAATATTATTAATGTTGATGTGTTTTTTCC
Philereme transversata genome assembly, chromosome: 14.
OZ004351.1:16494090-16494109
TTCCGCTATGCCGCTACCAAGTGTTGGAAA16494090ACAATCCCACCACCCCTAAAAAATATTATTAATGTTGATGTGTTTAGGTT
Philereme transversata genome assembly, chromosome: 19.
OZ004356.1:7812327-7812346
TTCCGCTATGCCGCTACCAAGTGTTGGAAA7812327ACAATCCCACCACCCCTAAAAAATATTATTAACGTGTTTAGGTTCAAGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTAGGGGTGGTGGGATTGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTAGGGGTGGTGGGATTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.265 | 0.257 | search_plus_done; http://172.18.8.135:50400/match?q=TTTAGGGGTGGTGGGATTGT&k=0&no_gap=0&offset=0&limit=50
0.499 | 0.233 | search_minus_done; http://172.18.8.135:50400/match?q=ACAATCCCACCACCCCTAAA&k=0&no_gap=0&offset=0&limit=36
0.507 | 0.009 | cgi_end;

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