GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-18 23:57:49, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo subsp. melo EST, clone PS_38-H12-M13R.
AM717939.2:2-22
T2TTTCAAAAAGCGAACCAGCTACTTTTCTCTCTCTCTCTCTCTCTCTCTCTC
EST11019317 CM-VEa library Cucumis melo cDNA clone VEa0012A15, mRNA sequence.
JG477604.1:81-101
CTCTTTCTTTCTCTCTCCATTCCTGTCGCT81TTTCAAAAAGCGAACCAGCTACTTTTCTCTCTCTCTCTCTCTCTCTCTCTC
Cucumis melo isolate PI 511890 chromosome 2.
CP136103.1:3335906-3335926
CTCTTTCTTTCTCTCTCCATTCCTGTCGCT3335906TTTCAAAAAGCGAACCAGCTACTTTTCTCTCTCTCTCTCTCTCTCTCTCTC
Cucumis melo genomic scaffold, anchoredscaffold00025.
LN681806.1:3307521-3307541
CTCTTTCTTTCTCTCTCCATTCCTGTCGCT3307521TTTCAAAAAGCGAACCAGCTACTTTTCTCTCTCTCTCTCTCTCTCTCTCTC
Cucumis melo genomic chromosome, chr_2.
LN713256.1:3307521-3307541
CTCTTTCTTTCTCTCTCCATTCCTGTCGCT3307521TTTCAAAAAGCGAACCAGCTACTTTTCTCTCTCTCTCTCTCTCTCTCTCTC
Lochmaea crataegi genome assembly, chromosome: 10.
OX387432.1:35124569-35124589
TCATCCATCTTTACCGAGTTTGTTTTGCCT35124569TAGCTGGTTCGCTTTTTGAAAAGCTCGAATTTCTTGGCTAAATTGCTTTCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTCAAAAAGCGAACCAGCTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCAAAAAGCGAACCAGCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.192 | 0.183 | search_plus_done; http://172.18.8.135:50800/match?q=TTTCAAAAAGCGAACCAGCTA&k=0&no_gap=0&offset=0&limit=50
0.212 | 0.020 | search_minus_done; http://172.18.8.135:50800/match?q=TAGCTGGTTCGCTTTTTGAAA&k=0&no_gap=0&offset=0&limit=45
0.213 | 0.001 | cgi_end;

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