GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 00:26:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS24060H07 KS24 Capsicum annuum cDNA, mRNA sequence.
GD123510.1:345-364
AGGAGCTCAAAATCTTCCCAAGTCTTCACA345TTTCAATGCATGACTGAGGCAAATATAACGAGGCGGTTCACTTTTTTTTT
TSA: Capsicum annuum MGMT_Contig40179 mRNA sequence.
JW090423.1:558-577
AGGAGCTCAAAATCTTCCCAAGTCTTCACA558TTTCAATGCATGACTGAGGCAAATATAACGAGGCGGTTCACTTTTTTTTT
Pinctada fucata DNA, chromosome 1, nearly complete sequence, Principal Pseudohaplotype.
AP027102.1:42328536-42328555
CCAACATGAAGCATATTGTAAGTATCTATT42328536TTTCAATGCATGACTGAGGCCATTTGAATACTTAAAGTCATAACGATTCA
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:124962178-124962197
TAAAAAAAAGTGAACCGCCTCGTTATATTT124962178GCCTCAGTCATGCATTGAAATGTGAAGACTTGGGAAGATTTTGAGCTCCT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:125802306-125802325
AAAAAAAAAGTGAACCGCCTCGTTATATTT125802306GCCTCAGTCATGCATTGAAATGTGAAGACTTGGGAAGATTTTGAGCTCCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTCAATGCATGACTGAGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCAATGCATGACTGAGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.189 | 0.181 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCAATGCATGACTGAGGC&k=0&no_gap=0&offset=0&limit=50
0.208 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTCAGTCATGCATTGAAA&k=0&no_gap=0&offset=0&limit=47
0.209 | 0.001 | cgi_end;

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