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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:10:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Nicotiana sylvestris mRNA, expressed in leaf, clone: L-043_F06.
BP746159.1:273-292
GCCAATGGTCCTATTGCATTGGAGACATCG273TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAACACTTGCATGTA
LH__Ea05H12.f LH__Ea Solanum habrochaites cDNA clone LH__Ea05H12 5', mRNA sequence.
DN169654.1:665-684
GCCAATGGCCCTATTGCATTGGAGACATCA665TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
JC10_C02i Forward JC Glycine max cDNA 5', mRNA sequence.
DW246182.1:530-549
GCCAATGGACCTATAGCGTTGGAGACATCG530TTTCCACCATGAGCAAATGACATGAAACATGCTGAGAGGANCTGCATGTA
Solanum melongena mRNA, clone: SmFL24G04, 3'end.
FS082649.1:606-625
GCCAATGGTCCTATTGCATTGGAGACATCA606TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
LH__Ea05H12.r LH_Ea Solanum habrochaites cDNA, mRNA sequence.
GT175383.1:664-683
GCCAATGGCCCTATTGCATTGGAGACATCA664TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
CCPO1113.g1 CCPO Wrightia tinctoria developing embryos (H) Wrightia tinctoria cDNA clone CCPO1113 3', mRNA sequence.
HS564690.1:572-591
GCTAAGGGACCTATTGCATTGGAGACATCA572TTTCCACCATGAGCAAATGACATGAAGCAGGCAGAGAGAACTTGCATGTA
32A0401043.1006 ZxSSHCAF Zygophyllum xanthoxylon cDNA, mRNA sequence.
JZ584432.1:355-374
GCCAGGGGGCCAATTGCATTGGAGACGTCG355TTTCCACCATGAGCAAATGACATGAAGCATGCTGAGAGGACCTGCATGTA
TSA: Cajanus cajan cultivar UPAS 120 contig22333.UPAS mRNA sequence.
EZ640050.1:912-931
GCCAATGGACCTATGGCATTGGATACATCA912TTTCCACCATGAGCAAATGACATGAAACATGCAGAGAGGACCTGCATGTA
TSA: Lens culinaris contig14551.Lecu mRNA sequence.
JI860792.1:594-613
GCTAACGGACCTATCGCGTTGGAGACATCA594TTTCCACCATGAGCAAATGACATAAAACATGCTGATAAAACCTGCATGTA
TSA: Pisum sativum Ps_contig_mira-ass_5840 mRNA sequence.
JI902661.1:29-48
TAACGGACCTATCGCGTTGGAAACATCA29TTTCCACCATGAGCAAATGACATGAAACATGCTGATAAAACCTGCATGTA
TSA: Ruditapes philippinarum Locus_11500.Ruphgonad mRNA sequence.
JO102185.1:877-896
ACTAGTGGTCCGATAGCATTGCTCACATCA877TTTCCACCATGAGCAAATGATCCAAATACAGCTGTGAGGACTTGAAGGAA
TSA: Capsicum annuum MGMT_Contig38226 mRNA sequence.
JW088470.1:752-771
GCCAATGGTCCTATTGCATTGGAAACATCA752TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
TSA: Nicotiana benthamiana isotig01616.Nb_leaf mRNA sequence.
KA737871.1:534-553
GCCAATGGTCCTATTGCATTGGAGACGTCA534TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAACACTTGCATGTA
TSA: Nicotiana benthamiana isotig01617.Nb_leaf mRNA sequence.
KA737872.1:534-553
GCCAATGGTCCAATTGCATTGGAGACATCA534TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
CHO_OF710xl07f1.ab1 CHO_OF Nicotiana tabacum genomic 5', genomic survey sequence.
ET980665.1:389-408
GCCAGAGGGCCTATCGCATTGGAGACATCA389TTTCCACCATGAGCAAATGACATGAAGCATGCTGATAAGACTTGCATATA
CHO_OF3239xo23f1.ab1 CHO_OF3 Nicotiana tabacum genomic 5', genomic survey sequence.
FH022254.1:452-471
GCCAGAGGGCCTATCGCATTGGAGACATCA452TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTTGCATAT
CHO_OF4947xh16r1.ab1 CHO_OF4 Nicotiana tabacum genomic 3', genomic survey sequence.
FH433092.1:323-342
GCCAGAGGGCCTATTGCATTGGAGACATCA323TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
CHO_OF5158xl11r1.ab1 CHO_OF5 Nicotiana tabacum genomic 3', genomic survey sequence.
FH741677.1:223-242
GCCAGAGGGCCTATTGCATTGGAGACATCA223TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
CHO_OF6733xj10r1.ab1 CHO_OF6 Nicotiana tabacum genomic 3', genomic survey sequence.
FH943402.1:176-195
GCCAGAGGGCCTATCGCATTGGAGACATCA176TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
CHO_OF6913xp14f1.ab1 CHO_OF6 Nicotiana tabacum genomic 5', genomic survey sequence.
FI012698.1:259-278
GCCAGAGGGCCTATCGCATTGGAGACATCA259TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
CHO_OF6921xj09f1.ab1 CHO_OF6 Nicotiana tabacum genomic 5', genomic survey sequence.
FI017238.1:83-102
GCCAGAGGGCCTATCGCATTGGAGACATCA83TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
GS_Ba018L05.R GS_Ba Glycine syndetika genomic 3', genomic survey sequence.
HN818226.1:467-486
GCCAACGGATCAGTGGCGTTGGAGACATCG467TTTCCACCATGAGCAAATGACATGAATCAGGCTGAGAGGACCTGTATGTA
34-L112092-1033-223-C09-pIfw IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-223-C09 5', genomic survey sequence.
JY431009.1:485-504
GCCAAGGGACCTATTGCATTAGAGACATCG485TTTCCACCATGAGCAAATGACATAAAGCAGGCCGAGAGAACCTGCATATA
Solanum tuberosum cultivar RH89-039-16 chromosome 5 clone RH078E16, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces.
AC238120.1:96831-96850
GCCAATGGCCCTATTGCATTGGAGACATCA96831TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
Solanum tuberosum cultivar RH89-039-16 chromosome 5 clone RH162D21, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC238309.1:29641-29660
GCCAATGGCCCTATTGCATTGGAGACATCA29641TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAAACTTGCATGTA
Eustoma grandiflorum DNA, chromosome 14, draft genome sequence.
AP025053.1:30874638-30874657
GCCAGAGGACCGATTGCGTTAGAGACATCA30874638TTTCCACCATGAGCAAATGACATGAAGCAAGCAGAGAGGACTTGCATGTA
Eustoma grandiflorum DNA, chromosome 28, draft genome sequence.
AP025067.1:28837464-28837483
GCCAGAGGACCGATCGCGTTAGAGACATCA28837464TTTCCACCATGAGCAAATGACATGAAGCAAGCAGAGAGAACTTGCATGTA
Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:138314553-138314572
GCCAATGGTCCTATTGCATTGGAAACATCA138314553TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
Solanum lycopersicum Micro-Tom DNA, chromosome 5, draft genome sequence.
AP028939.1:7069969-7069988
GCCAATGGCCCTATTGCATTGGAGACATCA7069969TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-17.
CP023129.1:15687281-15687300
GCCAATGGACCTATGGCATTGGAGACATCA15687281TTTCCACCATGAGCAAATGACATGAAACATGCTGAGAGAACCTGCATGTA
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-18.
CP023130.1:17330058-17330077
GCCAGAGGACCTATGGCATTGGAAACATCA17330058TTTCCACCATGAGCAAATGACATGAAGCATGCTGACATTACCTGCATGTA
Solanum lycopersicum cultivar I-3 chromosome 5.
CP023761.1:6726487-6726506
GCCAATGGCCCTATTGCATTGGAGACATCA6726487TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
Solanum tuberosum cultivar P8 chromosome 5.
CP046690.1:10315246-10315265
GCCAATGGCCCTATTGCATTGGAGACATCA10315246TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
Solanum tuberosum cultivar MSH/14-112 chromosome 5.
CP046698.1:10315654-10315673
GCCAATGGCCCTATTGCATTGGAGACATCA10315654TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAANACTTGCATGTA
Solanum pinnatisectum cultivar CGN17745 chromosome 5.
CP047565.1:10312650-10312669
GCCAATGGCCCTATTGCATTGGAGACATCA10312650TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
Solanum tuberosum cultivar Solyntus chromosome 5.
CP055238.1:11760729-11760748
GCCAATGGCCCTATTGCATTGGAGACATCA11760729TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
Daucus carota subsp. sativus cultivar DH1 chromosome 8.
CP093350.1:32529864-32529883
GCTAATGGACCTATTGCATTAGCCACGTCG32529864TTTCCACCATGAGCAAATGACATGAAACATGCTGATAGGACTTGCATGTA
Coriaria nepalensis isolate Cnep1 chromosome 13.
CP114473.1:8675547-8675566
GCTAAAGGGCCTATAGCATTAGAAACATCA8675547TTTCCACCATGAGCAAATGACATGAAGCAAGCTGAAAGGACTTGCATGTA
Coriaria nepalensis isolate Cnep1 chromosome 13.
CP114493.1:8774655-8774674
GCTAAAGGGCCTATAGCATTAGAAACATCA8774655TTTCCACCATGAGCAAATGACATGAAGCAAGCTGAAAGGACTTGCATGTA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 11.
CP124709.1:31339857-31339876
GCCAATGGTCCTATTGCATTGGAGACATCA31339857TTTCCACCATGAGCAAATGACATAAAGCAGGCAGATAAGACTTGCATGTA
Daucus carota isolate Kuroda chromosome 8.
CP125308.1:45171662-45171681
GCTAATGGACCTATTGCATTAGCCACGTCG45171662TTTCCACCATGAGCAAATGACATGAAACATGCTGATAGGACTTGCATGTA
Solanum verrucosum cultivar 11H23 chromosome 5.
CP133616.1:9736914-9736933
GCCAATGGCCCTATTGCATTGGAGACATCA9736914TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
Solanum pennellii chromosome ch05, complete genome.
HG975444.1:7187945-7187964
GCCAATGGCCCTATTGCATTGGAGACATCA7187945TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
Solanum lycopersicum chromosome ch05, complete genome.
HG975517.1:6726442-6726461
GCCAATGGCCCTATTGCATTGGAGACATCA6726442TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
Solanum lycopersicum genome assembly, chromosome: 5.
OU640348.1:7921314-7921333
GCCAATGGCCCTATTGCATTGGAGACATCA7921314TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATATA
Ailanthus altissima genome assembly, chromosome: 3.
OX327685.1:27957451-27957470
GCCAAGGGACCTATGGCATTGGAGACATCA27957451TTTCCACCATGAGCAAATGACATGAAGCAGGCTGACAGGACCTGCATATA
Solanum dulcamara genome assembly, chromosome: 2.
OX359253.1:16903080-16903099
GCCAATGGTCCTATTGCATTGGAGACATCA16903080TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAAGACTTGCATGTA
Hedera helix genome assembly, chromosome: 16.
OX359279.1:44389875-44389894
GCCAAGGGGCCTATTGCGTTGGAGACATCA44389875TTTCCACCATGAGCAAATGACATGAAGCAGGCTGATAGGACTTGCATGTA
Chenopodium album genome assembly, chromosome: 21.
OX419228.1:36678123-36678142
GCTAATGGACCAATAGCATTAGAGACATCG36678123TTTCCACCATGAGCAAATGACATGAAGCACGCTGAGAGGACCTGCATATA
Vicia faba genome assembly, chromosome: 4.
OX451739.1:615430091-615430110
GCTAACGGACCTATCGCGTTGGAAACATCA615430091TTTCCACCATGAGCAAATGACATGAAACATGCTGATAAAACCTGCATGTA
Oldenlandia corymbosa var. corymbosa genome assembly, chromosome: 2.
OX459119.1:1996635-1996654
GCCAAGGGACCTATTGCATTAGACACATCG1996635TTTCCACCATGAGCAAATGACATGAAACAGGCAGAGAGGATTTGCATGTA
Inga oerstediana genome assembly, chromosome: 11.
OY723409.1:48870484-48870503
GCCAAGGGGCCTATGGCGTTGGACACGTCG48870484TTTCCACCATGAGCAAATGACATGAAGCATGCAGAGAGGACTTGCATGTA
Inga laurina genome assembly, chromosome: 12.
OY979712.1:40432476-40432495
GCCAAGGGGCCTATGGCGTTGGACACGTCG40432476TTTCCACCATGAGCAAATGACATGAAGCATGCAGAGAGGACTTGCATGTA
Flavobacterium sp. KACC 22763 chromosome, complete genome.
CP117879.1:2908540-2908559
TTAACGGGAACAGGAAACGGATGTCCATCT2908540TTTCCACCATGAGCAAATGAAAAACGGGCTGGATCTTCAAAGCGAGTTGG
Sepioteuthis lessoniana genome assembly, chromosome: 15.
OY757918.1:56223386-56223405
CTTGGAAAAAGAATATTTTACCTGACATCA56223386TTTCCACCATGAGCAAATGAACCAAAAACAGCAGTGAGTATTTGCAGAAA
Spisula subtruncata genome assembly, chromosome: 17.
OY787676.1:13850883-13850902
AAAACACTAACGCATTTTTACCTGACGTCA13850883TTTCCACCATGAGCAAATGATCCGAACACAGCGGTTAGTACTTGGAGAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTCCACCATGAGCAAATGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCCACCATGAGCAAATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.067 | 1.058 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCCACCATGAGCAAATGA&k=0&no_gap=0&offset=0&limit=50
1.215 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=TCATTTGCTCATGGTGGAAA&k=0&no_gap=0&offset=0&limit=0
1.215 | 0.000 | cgi_end;

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