GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 10:01:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Scyliorhinus canicula genome assembly, chromosome: 1.
LR744030.1:9833633-9833652
AAAAATTCTCATCCTTGTTTACAAATGGCA9833633TTTCCCTCCCAATGTCTGTAGTCTCCTCCAGCCCCAAACCATCAAACCAC
MAG: Pithovirus LCDPAC01 genomic sequence.
MK500288.1:9372-9391
GATAAATACGGACTCCAGAAGACTGTACTA9372TTTCCCTCCCAATGTCTGTACCCATAGGTGTATCTGGGTTCATCACAATT
Sepia lycidas genome assembly, chromosome: 17.
OZ010587.1:75457683-75457702
AAAGAATTTGCATCAGAATAGGCAAAGTAT75457683TTTCCCTCCCAATGTCTGTATATTTGGGTGTATCCAAAATACTACCCAAA
CA00-XX-RT8-034-B05-AB.F Coffea arabica RT8 Coffea arabica cDNA clone CA00-XX-RT8-034-B05-AB, mRNA sequence.
GW451874.1:46-65
TTGATAGTGAATATATAGTTCATCAGAGTA46TACAGACATTGGGAGGGAAATCTGCCAAAAAGACCTCAATTGCTGGAGGG
Coffea arabica microsatellite DNA, clone ZapII.20.
AJ250253.1:296-315
TTGATAGTGAATACATAGTTCATCAGAGTA296TACAGACATTGGGAGGGAAATCTGCCAAAAAGGTGATCTACCTATTCACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTCCCTCCCAATGTCTGTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCCCTCCCAATGTCTGTA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.124 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCCCTCCCAATGTCTGTA&k=0&no_gap=0&offset=0&limit=50
0.236 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=TACAGACATTGGGAGGGAAA&k=0&no_gap=0&offset=0&limit=47
0.237 | 0.001 | cgi_end;

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