GGGenome | Results

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2025-03-17 08:21:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Trifolium repens mRNA, clone: WCC25n18_088, unspecified EST.
FY463049.1:233-252

GGCTTCTTCTGTTGCTGCTGTTTCTACTTC233TTTCCTTCTCACCAATTCCGCCGCATCATCCATAAACAAGATGAACCACT

Ceriagrion tenellum genome assembly, chromosome: 10.
OY720642.1:41790555-41790574

CTCACCTGATGTTTTTAATTTTCAATTTTA41790555TTTCCTTCTCACCAATTCCGGGTATATTCATTGGCATTACCAAATCCATT

Lordithon lunulatus genome assembly, chromosome: 3.
OZ012668.1:10589120-10589139

TCCGTCTTCAGACCTCCTATCTATATGTAC10589120TTTCCTTCTCACCAATTCCGTAGCTTCCCTCAACGACTCTCGCTCAGTTC

Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:57895566-57895585

AAGTTGAAGAAATCGGAGAAAGATTACCGG57895566CGGAATTGGTGAGAAGGAAAGAAGTAGAAACAGCAGCAACAGAAGAAGCC

Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:60230375-60230394

AAGTTGAAGAAATCGGAGAAAGATTACCGG60230375CGGAATTGGTGAGAAGGAAAGAAGTAGAAACAGCAGCAACAGAAGAAGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.237 | 0.228 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCCTTCTCACCAATTCCG&k=0&no_gap=0&offset=0&limit=50
0.283 | 0.046 | search_minus_done; http://172.18.8.135:50400/match?q=CGGAATTGGTGAGAAGGAAA&k=0&no_gap=0&offset=0&limit=47
0.284 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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