GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 00:14:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Meleagris gallopavo genome assembly, chromosome: 10.
OW982261.1:18765823-18765841
ACATCCATGGAATATCTCCATATGACTTTA18765823TTTCCTTGCCTTCCCCGAAGAATTAAAAAATTATTAGGTTTCAAGCCAA
Ectemnius continuus genome assembly, chromosome: 1.
OU342856.1:21022855-21022873
CACATGCCTAAAAGCAGATTCCCCTTCTAC21022855TTTCCTTGCCTTCCCCGAATTGTAGGTGTGTGACATGTAGTCCCGGACT
Euzophera pinguis genome assembly, chromosome: 7.
OX376161.1:8215175-8215193
TGTCTAGTGGAGCCAAGGCCACTAGTAAAG8215175TTTCCTTGCCTTCCCCGAAGGAGCTAATAGAGAAGACATGTCTTCTAAA
Lampropteryx suffumata genome assembly, chromosome: 25.
OX402569.1:11684006-11684024
AATTCAATTATTTTATATTTTTTAAAAACA11684006TTTCCTTGCCTTCCCCGAACAAGTATGTCTACTTTTGTACGGAGAAGTT
Icerya purchasi genome assembly, chromosome: 1.
OX731680.1:471614456-471614474
ATGCTTTCTAGATATTTTAATAATTTATGA471614456TTTCCTTGCCTTCCCCGAAAAAGTTAATGTTGCATTAGAATTATTATAA
Muscardinus avellanarius genome assembly, chromosome: 3.
OY726559.1:113128888-113128906
AGCTGGAGCCAGCCTGGCCTGGGAAGAGGC113128888TTCGGGGAAGGCAAGGAAACAGGCCTGGGAGCCGTTTTCAGGGAGACAT
Rhinatrema bivittatum genome assembly, chromosome: 3.
LR584389.1:279453872-279453890
AGACTTGCATCTGTTGAGAGAACCAGCCAG279453872TTCGGGGAAGGCAAGGAAACACCCCTGCTCAGATGAGCCTCCTGCAACC
Allium cepa genome assembly, chromosome: 1.
LR994629.1:140205750-140205768
CAAGGTTAAGGACATTCAAGGTTCAGGTCA140205750TTCGGGGAAGGCAAGGAAATAAGGGAACTAGGAACCAAAGCAATCAAAG
Pontibacter sp. G13 chromosome, complete genome.
CP134696.1:4098374-4098392
CAAGTTCATATCGCTAGTTTGGCAAGGTAT4098374TTCGGGGAAGGCAAGGAAATTCATGCGAAAAAGGAACTTGTCCCCCACG
Zygaena filipendulae genome assembly, chromosome: 22.
OU015671.1:6691056-6691074
ATGATTTTTTTTTTGTTGAAGTTTACCCCT6691056TTCGGGGAAGGCAAGGAAATCTAAGTCCATACAGCTTGATTAGGAAATC
Lampropteryx suffumata genome assembly, chromosome: 25.
OX402569.1:11879986-11880004
AACTTCTCCGTACAAAAGTAGACATACTTG11879986TTCGGGGAAGGCAAGGAAATGTTTTTAAAATATATAAAATTATTTAATT
Lampropteryx suffumata genome assembly, chromosome: 25.
OX402569.1:12119045-12119063
AACTTCTCCGTACAAAAGTAGACATACTTG12119045TTCGGGGAAGGCAAGGAAATGTTTTTAAAATATATAAAATAATTGAATT
Lampropteryx suffumata genome assembly, chromosome: 25.
OX402569.1:13026371-13026389
AACTTCTCCGTACAAAAGTAGACATACTTG13026371TTCGGGGAAGGCAAGGAAATGTTTTTAAAATATATAAAATTATTTAATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTCCTTGCCTTCCCCGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCCTTGCCTTCCCCGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCCTTGCCTTCCCCGAA&k=0&no_gap=0&offset=0&limit=50
0.158 | 0.041 | search_minus_done; http://172.18.8.135:50400/match?q=TTCGGGGAAGGCAAGGAAA&k=0&no_gap=0&offset=0&limit=45
0.163 | 0.005 | cgi_end;

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